WormBase Tree Display for Gene: WBGene00003765
expand all nodes | collapse all nodes | view schema
| WBGene00003765 | SMap | S_parent | Sequence | B0213 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nlp-27 | Person_evidence | WBPerson242 | |||||
| Sequence_name | B0213.2 | ||||||||
| Molecular_name | B0213.2 | ||||||||
| B0213.2.1 | |||||||||
| CE16773 | |||||||||
| Other_name | CELE_B0213.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nlp-27 | ||||||||
| DB_info | Database | AceView | gene | 5E467 | |||||
| WormQTL | gene | WBGene00003765 | |||||||
| WormFlux | gene | WBGene00003765 | |||||||
| NDB | locus_tag | CELE_B0213.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003765|UniProtKB=O44666 | |||||||
| family | PTHR22552 | ||||||||
| NCBI | gene | 178806 | |||||||
| RefSeq | protein | NM_071710.9 | |||||||
| TrEMBL | UniProtAcc | O44666 | |||||||
| UniProt_GCRP | UniProtAcc | O44666 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033129 | ||||||||
| 00033130 | |||||||||
| 00033131 | |||||||||
| Ortholog | WBGene00024537 | Caenorhabditis briggsae | Person_evidence | WBPerson168 | |||||
| WBPerson2531 | |||||||||
| WBGene00045436 | Caenorhabditis remanei | Person_evidence | WBPerson168 | ||||||
| WBPerson2531 | |||||||||
| From_analysis | OMA | ||||||||
| WBGene00100331 | Pristionchus pacificus | From_analysis | OMA | ||||||
| WBGene00121896 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00181963 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00133597 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00138055 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00139213 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| chrV_pilon.g13884 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | nlp-27 encodes a predicted neuropeptide with homology to C. elegans nlp-28 through nlp-31. | Paper_evidence | WBPaper00004975 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in defense response to Gram-negative bacterium. Predicted to be located in membrane. Expressed in ASI; head neurons; hypodermis; intestine; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0213.2 | |||||||
| Corresponding_transcript | B0213.2.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf231623 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00038735 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027992 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007493 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1692 | ||||||||
| Expr1016189 | |||||||||
| Expr1142946 | |||||||||
| Expr2014291 | |||||||||
| Expr2032532 | |||||||||
| Drives_construct | WBCnstr00000499 | ||||||||
| WBCnstr00010383 | |||||||||
| WBCnstr00035883 | |||||||||
| Construct_product | WBCnstr00000499 | ||||||||
| WBCnstr00035883 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (228) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | V | Position | -7.13789 | |||||
| Positive | Positive_clone | B0213 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004975 | ||||||||
| WBPaper00006488 | |||||||||
| WBPaper00025088 | |||||||||
| WBPaper00026655 | |||||||||
| WBPaper00032031 | |||||||||
| WBPaper00050183 | |||||||||
| WBPaper00058870 | |||||||||
| WBPaper00060703 | |||||||||
| WBPaper00063691 | |||||||||
| WBPaper00065565 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
