WormBase Tree Display for Gene: WBGene00021978
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| WBGene00021978 | SMap | S_parent | Sequence | Y58A7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y58A7A.4 | |||||||
| Molecular_name | Y58A7A.4 | ||||||||
| Y58A7A.4.1 | |||||||||
| CE26197 | |||||||||
| Other_name | Y58A7A.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y58A7A.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y58A7A.4 | ||||||||
| DB_info | Database | AceView | gene | 5F560 | |||||
| WormQTL | gene | WBGene00021978 | |||||||
| WormFlux | gene | WBGene00021978 | |||||||
| NDB | locus_tag | CELE_Y58A7A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021978|UniProtKB=Q966A5 | |||||||
| family | PTHR31063 | ||||||||
| NCBI | gene | 3565089 | |||||||
| RefSeq | protein | NM_071960.6 | |||||||
| TREEFAM | TREEFAM_ID | TF317685 | |||||||
| TrEMBL | UniProtAcc | Q966A5 | |||||||
| UniProt_GCRP | UniProtAcc | Q966A5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090835 | ||||||||
| 00126158 | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00017466 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017467 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017834 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021977 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021979 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable zinc ion binding activity. Expressed in head neurons and intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y58A7A.4 | |||||||
| Corresponding_transcript | Y58A7A.4.1 | ||||||||
| Other_sequence | CBC09234_1 | ||||||||
| Associated_feature | WBsf652607 | ||||||||
| WBsf668938 | |||||||||
| WBsf233645 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057728 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057727 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3915 | ||||||||
| Expr1013899 | |||||||||
| Expr1161155 | |||||||||
| Expr2008089 | |||||||||
| Expr2026327 | |||||||||
| Drives_construct | WBCnstr00011748 | ||||||||
| WBCnstr00024378 | |||||||||
| Construct_product | WBCnstr00024378 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (275) | |||||||||
| Interaction | WBInteraction000581245 | ||||||||
| Map_info | Positive | Positive_clone | Y58A7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -2.8277 | |||||||
| Reference | WBPaper00035429 | ||||||||
| Method | Gene |
