WormBase Tree Display for Gene: WBGene00008476
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| WBGene00008476 | SMap | S_parent | Sequence | E03H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | E03H4.8 | |||||||
| Molecular_name | E03H4.8 | ||||||||
| E03H4.8.1 | |||||||||
| CE09135 | |||||||||
| E03H4.8.2 | |||||||||
| Other_name | CELE_E03H4.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | E03H4.8 | ||||||||
| DB_info | Database | AceView | gene | 1N14 | |||||
| WormQTL | gene | WBGene00008476 | |||||||
| WormFlux | gene | WBGene00008476 | |||||||
| NDB | locus_tag | CELE_E03H4.8 | |||||||
| NCBI | gene | 184023 | |||||||
| RefSeq | protein | NM_060750.6 | |||||||
| TREEFAM | TREEFAM_ID | TF300688 | |||||||
| TrEMBL | UniProtAcc | O17742 | |||||||
| UniProt_GCRP | UniProtAcc | O17742 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (52) | |||||||||
| Strain | WBStrain00033060 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00116370 | ||||||||
| 00116371 | |||||||||
| 00116372 | |||||||||
| 00116373 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00009542 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00022119 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00270321 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | E03H4.8 encodes one of two C. elegans proteins with similarity to the beta' coat protein of the COPI vesicular coat; by homology, E03H4.8 is required for retrograde trafficking from the cis-Golgi to the endoplasmic reticulum and trafficking within the Golgi stack; in C. elegans, RNAi experiments indicate that E03H4.8 is required for proper germ cell development and reproduction; about 10% to 20% of E03H4.8 transcripts are RNA edited to change A to G resulting in a change to residue 331 from an S to a G. | Paper_evidence | WBPaper00045975 | |||||
| WBPaper00041129 | |||||||||
| WBPaper00038381 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson4025 | |||||||||
| Date_last_updated | 28 Dec 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable structural molecule activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of membrane coat. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E03H4.8 | |||||||
| Corresponding_transcript | E03H4.8.1 | ||||||||
| E03H4.8.2 | |||||||||
| Other_sequence | CJC14185_1 | ||||||||
| Associated_feature | WBsf649662 | ||||||||
| WBsf716957 | |||||||||
| WBsf220428 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1027574 | ||||||||
| Expr1033687 | |||||||||
| Expr1147644 | |||||||||
| Expr2002153 | |||||||||
| Expr2020373 | |||||||||
| Drives_construct | WBCnstr00032941 | ||||||||
| Construct_product | WBCnstr00032941 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (208) | |||||||||
| Interaction | WBInteraction000519797 | ||||||||
| WBInteraction000580597 | |||||||||
| Map_info | Positive | Positive_clone | E03H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.197 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
