WormBase Tree Display for Gene: WBGene00008476
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WBGene00008476 | SMap | S_parent | Sequence | E03H4 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (52) | ||||||
Strain | WBStrain00033060 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00116370 | |||||
00116371 | ||||||
00116372 | ||||||
00116373 | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00009542 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WormBase-Compara | ||||||
WBGene00022119 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00270321 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | E03H4.8 encodes one of two C. elegans proteins with similarity to the beta' coat protein of the COPI vesicular coat; by homology, E03H4.8 is required for retrograde trafficking from the cis-Golgi to the endoplasmic reticulum and trafficking within the Golgi stack; in C. elegans, RNAi experiments indicate that E03H4.8 is required for proper germ cell development and reproduction; about 10% to 20% of E03H4.8 transcripts are RNA edited to change A to G resulting in a change to residue 331 from an S to a G. | Paper_evidence | WBPaper00045975 | ||
WBPaper00041129 | ||||||
WBPaper00038381 | ||||||
Curator_confirmed | WBPerson1843 | |||||
WBPerson4025 | ||||||
Date_last_updated | 28 Dec 2014 00:00:00 | |||||
Automated_description | Predicted to enable structural molecule activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of membrane coat. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | E03H4.8 | ||||
Corresponding_transcript | E03H4.8.1 | |||||
E03H4.8.2 | ||||||
Other_sequence | CJC14185_1 | |||||
Associated_feature | WBsf649662 | |||||
WBsf716957 | ||||||
WBsf220428 | ||||||
Experimental_info | RNAi_result (12) | |||||
Expr_pattern | Expr1027574 | |||||
Expr1033687 | ||||||
Expr1147644 | ||||||
Expr2002153 | ||||||
Expr2020373 | ||||||
Drives_construct | WBCnstr00032941 | |||||
Construct_product | WBCnstr00032941 | |||||
Microarray_results (15) | ||||||
Expression_cluster (208) | ||||||
Interaction | WBInteraction000519797 | |||||
WBInteraction000580597 | ||||||
Map_info | Positive | Positive_clone | E03H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | I | 13.197 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
WBPaper00064339 | ||||||
Method | Gene |