WormBase Tree Display for Gene: WBGene00011462

WBGene00011462 SMap: S_parent: Sequence: T05A10
  Identity: Version: 4
    Name: CGC_name: vap-2 Person_evidence: WBPerson7894
            WBPerson381
      Sequence_name: T05A10.5
      Molecular_name: T05A10.5a
        T05A10.5a.1
        CE44291
        T05A10.5b
        CE50380
        T05A10.5c
        CE50441
        T05A10.5b.1
        T05A10.5c.1
      Other_name: scl-22 Person_evidence: WBPerson261
        CELE_T05A10.5 Accession_evidence: NDB BX284606
      Public_name: vap-2
    DB_info: Database: AceView gene XL408
        WormQTL gene WBGene00011462
        WormFlux gene WBGene00011462
        NDB locus_tag CELE_T05A10.5
        Panther gene CAEEL|WormBase=T05A10.5b|UniProtKB=A0A0K3AST9
          family PTHR10334
        NCBI gene 181273
        RefSeq protein NM_001313449.4
            NM_077401.7
            NM_001313448.4
        TrEMBL UniProtAcc P90958
            A0A0K3AST9
            A0A0K3AWG2
        UniProt_GCRP UniProtAcc A0A0K3AST9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 Nov 2007 11:51:23 WBPerson2970 Name_change: CGC_name: scl-22
        3 08 Jul 2011 16:11:30 WBPerson2970 Event: Acquires_merge: WBGene00011461
        4 28 Nov 2014 08:07:55 WBPerson2970 Name_change: CGC_name: vap-2
                Other_name: scl-22
      Acquires_merge: WBGene00011461
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vap
    Allele (43)
    RNASeq_FPKM (74)
    GO_annotation: 00001105
      00001106
    Ortholog (31)
    Paralog (27)
    Structured_description: Automated_description: Predicted to be located in extracellular space. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05A10.5a
      T05A10.5b
      T05A10.5c
    Corresponding_CDS_history: T05A10.5:wp209
    Corresponding_transcript: T05A10.5a.1
      T05A10.5b.1
      T05A10.5c.1
    Other_sequence: Oden_isotig19726
      AF001100.1
      Dviv_isotig27766
    Associated_feature: WBsf1006821
      WBsf1006822
      WBsf1023772
      WBsf237892
  Experimental_info: RNAi_result: WBRNAi00052435 Inferred_automatically: RNAi_primary
      WBRNAi00070874 Inferred_automatically: RNAi_primary
      WBRNAi00035163 Inferred_automatically: RNAi_primary
      WBRNAi00070875 Inferred_automatically: RNAi_primary
      WBRNAi00018173 Inferred_automatically: RNAi_primary
      WBRNAi00018172 Inferred_automatically: RNAi_primary
      WBRNAi00052434 Inferred_automatically: RNAi_primary
      WBRNAi00035162 Inferred_automatically: RNAi_primary
      WBRNAi00071630 Inferred_automatically: RNAi_primary
      WBRNAi00071841 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029167
      Expr1156055
      Expr2017961
      Expr2036097
    Drives_construct: WBCnstr00030637
    Construct_product: WBCnstr00030637
    Microarray_results (34)
    Expression_cluster (219)
    Interaction (99)
  Map_info: Map: X Position: 2.53228
    Positive: Positive_clone: T05A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033099
    WBPaper00033394
    WBPaper00038491
    WBPaper00048405
    WBPaper00049847
    WBPaper00055090
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene