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WormBase Tree Display for Gene: WBGene00003096

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Name Class

WBGene00003096SMapS_parentSequenceC02A12
IdentityVersion1
NameCGC_namelys-7Person_evidenceWBPerson168
Sequence_nameC02A12.4
Molecular_nameC02A12.4
C02A12.4.1
CE07828
Other_nameCELE_C02A12.4Accession_evidenceNDBBX284605
Public_namelys-7
DB_infoDatabaseAceViewgene5D960
WormQTLgeneWBGene00003096
WormFluxgeneWBGene00003096
NDBlocus_tagCELE_C02A12.4
PanthergeneCAEEL|WormBase=WBGene00003096|UniProtKB=O16202
familyPTHR23208
NCBIgene178772
RefSeqproteinNM_071571.9
SwissProtUniProtAccO16202
TREEFAMTREEFAM_IDTF316378
UniProt_GCRPUniProtAccO16202
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlys
Allele (30)
StrainWBStrain00031984
WBStrain00031985
WBStrain00004711
WBStrain00004740
RNASeq_FPKM (74)
GO_annotation (14)
Ortholog (20)
ParalogWBGene00003090Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003091Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003092Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003093Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003094Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003095Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003097Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003098Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003099Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionlys-7 encodes an enzyme homologous to an antimicrobial lysozyme encoded by the LYS4 gene of the protozoan parasite Entamoeba histolytica; LYS-7 functions in the innate immune response as an antimicrobial enzyme that, by homology, hydrolyzes the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of prokaryotic cell walls; loss of lys-7 activity results in enhanced susceptibility to P. aeruginosa PA14, renders worms susceptible to Cryptococcus neoformans killing, but enhances tolerance to the enteric bacteria Salmonella typhimurium; lys-7 expression is significantly upregulated in response to infection with the Gram-negative bacterium Serratia marcescens; constitutive expression of lys-7 mRNA is detected in the intestine and the intestinal valve cells.Paper_evidenceWBPaper00004651
WBPaper00005382
WBPaper00005569
WBPaper00005654
WBPaper00041211
WBPaper00038223
WBPaper00032276
Curator_confirmedWBPerson1843
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in defense response to other organism. Expressed in head neurons; intestine; and rectal gland cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC02A12.4
Corresponding_transcriptC02A12.4.1
Other_sequence (84)
Associated_featureWBsf019148
WBsf019149
WBsf652532
WBsf233493
WBsf233494
Experimental_infoRNAi_result (21)
Expr_patternExpr1973
Expr4716
Expr10716
Expr1018008
Expr1143497
Expr2013318
Expr2031549
Drives_constructWBCnstr00009965
WBCnstr00012193
WBCnstr00015892
WBCnstr00017492
WBCnstr00036232
WBCnstr00041439
Construct_productWBCnstr00009965
WBCnstr00012193
WBCnstr00036232
Microarray_results (18)
Expression_clusterWBPaper00005700:transmembrane_protein
WBPaper00028451:Oogenic_protein
WBPaper00031040:Cluster_5
WBPaper00032031:DConiospora_upregulated_cDNA_12h
WBPaper00032031:DConiospora_upregulated_cDNA_24h
WBPaper00032031:DConiospora_upregulated_OligoArray_24h
WBPaper00032425:down_in_rde-4
WBPaper00032425:down_in_zfp-1
WBPaper00034761:hlh-30_downregulated
WBPaper00035269:cde-1_regulated
WBPaper00036291:ung-1_regulated
WBPaper00037047:aging_accelerated_insoluble_protein
WBPaper00037047:insoluble_protein
WBPaper00037624:ets-4(ok165)_upregulated
WBPaper00037950:AVE-neuron_embryo_enriched
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038213:E.coli(LF82)_24h_upregulated
WBPaper00038213:E.coli(LF82)_72h_upregulated
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038289:oocyte_protein
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040209:B.thuringiensis_downregulated_MY18
WBPaper00040446:insoluble_protein
WBPaper00041072:UTX-1_interacting_protein
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042477:prp-8(RNAi)_upregulated_RNAseq
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044005:DAF-16_upregulated
WBPaper00044128:daf-2(e1370)_upregulated
WBPaper00044128:DietaryRestriction_downregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00044857:BAR-1_downregulated
WBPaper00045303:ZK1236.1(tm4178)_upregulated
WBPaper00045316:prg-1_upregulated_L3
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045401:N.parisii_40h_downregulated
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_downregulated
WBPaper00045774:clk-1_downregulated_CoQ10_independent
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046337:monosomal_N2_vs_daf-2_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00046496:Rifampicin_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046509:lin-35(n745)_upregulated
WBPaper00046527:glucose_downregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00047132:skn-1(RNAi)_downregulated
WBPaper00048530:fshr-1(ok778)_upregulated
WBPaper00048952:glucose_repressed
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049905:Age_variant_expression
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049954:BPA_downregulated
WBPaper00049954:BPS_downregulated
WBPaper00050121:mir-60(n4947)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050182:lmn-1(L535P)_downregulated
WBPaper00050193:cec-4(ok3124)_upregulated_L1
WBPaper00050332:daf-16(RNAi)_downregulated
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050636:aging_regulated_insoluble_protein
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051021:4-bromodiphenyl-ether_downregulated
WBPaper00051039:intestine_enriched
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053020:sid-3(ok973)_upregulated
WBPaper00053020:sta-1(ok587)_upregulated
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053402:his-3(RNAi)_downregulated
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00053615:SMO-1_target
WBPaper00053664:ins-11(tm1053)_downregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00053814:25C_upregulated_PY79
WBPaper00054191:H3.3(null)_L1_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00054791:HSP90(neuro)_upregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055060:flr-1(RNAi)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:hif-1(ia4)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00055944:C.butyricum_vs_OP50_downregulated
WBPaper00055969:electromagnetic-field_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056039:efa-6(tm3124)_upregulated
WBPaper00056039:ptl-1(ok621)_upregulated
WBPaper00056073:R24_upregulated_nhr-86_dependent
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:hpx-2(dg047)_upregulated_E.faecalis
WBPaper00056139:gut-microbiota_upregulated
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056218:daf-16(mu86)_upregulated_Day5
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
WBPaper00056446:hsb-1(cg116)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056586:kri-1(ok1251)_downregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_20C
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057149:prgn-1(tm985)_upregulated
WBPaper00057196:raga-1(ok386)_upregulated)
WBPaper00057265:metaformin_downregulated_OP50
WBPaper00057288:Cold_downregulated_protein
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00058665:amino-functionized-graphene-oxide_upregulated_mRNA
WBPaper00058665:graphene-oxide_upregulated_mRNA
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:npr-8(ok1439)_downregulated_PA14
WBPaper00059117:B.subtilis_upregulated
WBPaper00059175:hlh-17p-XBP-1_upregulated
WBPaper00059224:tph-1(mg280)_downregulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059378:cec-4(ok3124);lmn-1(Y59C)_vs_lmn-1(Y59C)_downregulated
WBPaper00059477:hlh-2(RNAi)_regulated
WBPaper00059477:lin-32(RNAi)_regulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059605:MUT-16_interacting
WBPaper00059605:simr-1(cmp36)_upregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059839:S.maltophilia_regulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060317:anc-1(RNAi)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060634:fhod-1(tm2363)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00060951:mrpl-2(osa3)_downregulated
WBPaper00061007:HB115_downregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061274:microgravity_downregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061390:daf-22(ok693)_ascarosides_downregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00061952:daf-18(nr2037)_downregulated
WBPaper00061952:daf-18(yh1)_downregulated
WBPaper00062056:lin-15B(we23)_downregulated
WBPaper00062056:lin-35(n745)_downregulated
WBPaper00062056:lin-37(n758)_downregulated
WBPaper00062078:NMR-HspB1_regulated
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062197:mec-8_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062335:sir-2.1(ok434)_upregulated_L3
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_protein
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062554:MAGU-2_interacting
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00062590:Aging_upregulated_intestine
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062672:let-418(n3536)_downregulated
WBPaper00062715:blmp-1(s71)_upregulated
WBPaper00063926:chd-7(gk290)_upregulated
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064130:Beta-Amyloid_8h_downregulated_mRNA
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064505:tamoxifen_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064532:pals-25(jy111)_upregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064789:Day9_vs_Day1_upregulated_neuron
WBPaper00064789:Day12_vs_Day1_upregulated_neuron
WBPaper00064841:tent-5(tm3504)_downregulated_transcript
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00064952:Day5_vs_Day1_upregulated_25C
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_Day1_upregulated_20C
WBPaper00064952:Day10_vs_Day1_upregulated_25C
WBPaper00064952:Day10_vs_Day5_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00064992:Eugenol_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065225:nhr-42(tm1375)_downregulated_S.aureus-infected
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065392:Lb.delbrueckii_downregulated
WBPaper00065392:Lb.gasseri_downregulated
WBPaper00065392:Lb.plantarum_downregulated
WBPaper00065392:Lb.reuteri_downregulated
WBPaper00065392:Lb.rhamnosus_downregulated
WBPaper00065392:P.pentosaceus_downregulated
WBPaper00065734:unc-25(e156)_downregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065759:dot-1.1(knu339)_upregulated
WBPaper00065835:Day5_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:3_1
WBPaper00065877:rege-1(imm070)_downregulated_OP50
WBPaper00065926:pgph-2(overepxreesion)_upregulated
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066083:hlh-17p-jmjd-1.2_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_downregulated_WT
cgc4386_cluster_3_1
cgc4489_group_25
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025099:MA_specific
WBPaper00025099:NI_specific
WBPaper00026629:L3_male_enriched
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00027342:alpha-Synuclein(A53T)_downregulated
WBPaper00027342:alpha-Synuclein(WT)_downregulated
WBPaper00027722:Microbacterium_nematophilum_upregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_upregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00031850:mdt-15(RNAi)_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00032948:FedUp
WBPaper00033101:spr-5_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035873:osm-7_regulated
WBPaper00035873:osm-11_regulated
WBPaper00035873:osmotically_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037113:CPF_16C_up-regulated
WBPaper00037113:DZN_16C_up-regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040876:mir-35_upregulated
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_2.0mM_Down
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041211:RPW-24_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00041906:I-3690_vs_OP50_10d
WBPaper00041906:I-4317_vs_OP50_10d
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042236:flcn-1(ok975)_upregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00044091:Bpseudomallei_regulated_qPCR-confirmed
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045015:nhr-25(RNAi)_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00049311:Ag-MNP_regulated
WBPaper00050515:nipi-3(fr4)_upregulated
WBPaper00053550:daf-19(m86)_downregulated_L1
WBPaper00055899:nitroguanidine_regulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc5976]:class_1
[cgc6390]:herm_soma-enriched
Interaction (200)
WBProcessWBbiopr:00000008
WBbiopr:00000039
Map_infoMapVPosition-10.8998Error0.024633
PositivePositive_cloneC02A12Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4881
4924
5423
Pos_neg_data10776
Pseudo_map_position
Reference (65)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene