WormBase Tree Display for Expression_cluster: WBPaper00040209:B.thuringiensis_downregulated_MY18
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| WBPaper00040209:B.thuringiensis_downregulated_MY18 | Description | Transcripts that showed significantly decreased expression after 8 hour of exposure of C.elegans strain MY18 to pathogenic B. thuringiensis B-18247. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differential gene expression was assessed with a mixed regression model, including pathogen as a fixed and array as a random factor using the restricted maximum likelihood (REML) approach. The pathogen effect was evaluated with an F3-test using a pooled estimator of the error-variance and comparison of the tabulated p-values with the F distribution rather than a permutation analysis, which was unsuitable for this study because of low sample size (maximum of four replicates). To correct for multiple testing authors adjusted the significance level with the help of the false discovery rate (FDR). | ||
| Reference | WBPaper00040209 | ||
| Based_on_WB_Release | 195 | ||
| Gene (232) | |||
| Attribute_of | Microarray_experiment | ||
| Regulation | Regulated_by_treatment | Bacteria infection: Bacillus thuringiensis B-18247 | |
| Associated_with | Life_stage | WBls:0000038 | |
| Remark | Type: Bacteria Infection |
