WormBase Tree Display for Gene: WBGene00003095

WBGene00003095 SMap: S_parent: Sequence: F58B3
  Identity: Version: 1
    Name: CGC_name: lys-6 Person_evidence: WBPerson168
      Sequence_name: F58B3.3
      Molecular_name: F58B3.3
        F58B3.3.1
        CE06005
      Other_name: CELE_F58B3.3 Accession_evidence: NDB BX284604
      Public_name: lys-6
    DB_info: Database: AceView gene 4M392
        WormQTL gene WBGene00003095
        WormFlux gene WBGene00003095
        NDB locus_tag CELE_F58B3.3
        Panther gene CAEEL|WormBase=WBGene00003095|UniProtKB=Q20968
          family PTHR23208
        NCBI gene 178087
        RefSeq protein NM_069793.7
        TREEFAM TREEFAM_ID TF316378
        TrEMBL UniProtAcc Q20968
        UniProt_GCRP UniProtAcc Q20968
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lys
    Allele (12)
    Strain: WBStrain00036775
      WBStrain00051088
    RNASeq_FPKM (74)
    GO_annotation: 00069804
      00069805
      00069806
      00110575
      00110576
      00110577
    Ortholog (41)
    Paralog: WBGene00003090 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003091 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003092 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003093 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003094 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003096 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003099 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003097 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003098 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lysozyme activity. Predicted to be involved in innate immune response and signal transduction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58B3.3
    Corresponding_transcript: F58B3.3.1
    Other_sequence (95)
    Associated_feature: WBsf230901
    Gene_product_binds: WBsf034246
      WBsf034251
      WBsf034331
      WBsf034332
  Experimental_info: RNAi_result: WBRNAi00092215 Inferred_automatically: RNAi_primary
      WBRNAi00033072 Inferred_automatically: RNAi_primary
      WBRNAi00092216 Inferred_automatically: RNAi_primary
      WBRNAi00048949 Inferred_automatically: RNAi_primary
      WBRNAi00048948 Inferred_automatically: RNAi_primary
      WBRNAi00075955 Inferred_automatically: RNAi_primary
      WBRNAi00015942 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1031465
      Expr1152686
      Expr2013317
      Expr2031548
    Drives_construct: WBCnstr00036233
    Construct_product: WBCnstr00014600
      WBCnstr00036233
    Microarray_results (12)
    Expression_cluster (254)
    Interaction (131)
  Map_info: Map: IV Position: 5.08626 Error: 0.003219
    Positive: Positive_clone: F58B3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005382
    WBPaper00006437
    WBPaper00024209
    WBPaper00031802
    WBPaper00065988
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene