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WormBase Tree Display for Gene: WBGene00003095

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Name Class

WBGene00003095SMapS_parentSequenceF58B3
IdentityVersion1
NameCGC_namelys-6Person_evidenceWBPerson168
Sequence_nameF58B3.3
Molecular_nameF58B3.3
F58B3.3.1
CE06005
Other_nameCELE_F58B3.3Accession_evidenceNDBBX284604
Public_namelys-6
DB_infoDatabaseAceViewgene4M392
WormQTLgeneWBGene00003095
WormFluxgeneWBGene00003095
NDBlocus_tagCELE_F58B3.3
PanthergeneCAEEL|WormBase=WBGene00003095|UniProtKB=Q20968
familyPTHR23208
NCBIgene178087
RefSeqproteinNM_069793.7
TREEFAMTREEFAM_IDTF316378
TrEMBLUniProtAccQ20968
UniProt_GCRPUniProtAccQ20968
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlys
Allele (12)
StrainWBStrain00036775
WBStrain00051088
RNASeq_FPKM (74)
GO_annotation00069804
00069805
00069806
00110575
00110576
00110577
Ortholog (41)
ParalogWBGene00003090Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003091Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003092Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003093Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003094Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003096Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003099Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003097Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003098Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lysozyme activity. Predicted to be involved in innate immune response and signal transduction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF58B3.3
Corresponding_transcriptF58B3.3.1
Other_sequence (95)
Associated_featureWBsf230901
Gene_product_bindsWBsf034246
WBsf034251
WBsf034331
WBsf034332
Experimental_infoRNAi_resultWBRNAi00092215Inferred_automaticallyRNAi_primary
WBRNAi00033072Inferred_automaticallyRNAi_primary
WBRNAi00092216Inferred_automaticallyRNAi_primary
WBRNAi00048949Inferred_automaticallyRNAi_primary
WBRNAi00048948Inferred_automaticallyRNAi_primary
WBRNAi00075955Inferred_automaticallyRNAi_primary
WBRNAi00015942Inferred_automaticallyRNAi_primary
Expr_patternExpr1031465
Expr1152686
Expr2013317
Expr2031548
Drives_constructWBCnstr00036233
Construct_productWBCnstr00014600
WBCnstr00036233
Microarray_results (12)
Expression_cluster (254)
InteractionWBInteraction000029766
WBInteraction000030493
WBInteraction000136314
WBInteraction000137235
WBInteraction000200973
WBInteraction000203256
WBInteraction000205511
WBInteraction000206436
WBInteraction000207247
WBInteraction000211685
WBInteraction000213180
WBInteraction000216070
WBInteraction000216336
WBInteraction000226268
WBInteraction000226813
WBInteraction000227333
WBInteraction000228942
WBInteraction000229192
WBInteraction000243181
WBInteraction000249439
WBInteraction000251157
WBInteraction000253359
WBInteraction000260972
WBInteraction000265676
WBInteraction000266784
WBInteraction000268690
WBInteraction000269257
WBInteraction000269944
WBInteraction000279331
WBInteraction000280290
WBInteraction000280947
WBInteraction000281044
WBInteraction000281117
WBInteraction000281810
WBInteraction000285627
WBInteraction000288263
WBInteraction000288340
WBInteraction000293577
WBInteraction000294216
WBInteraction000294872
WBInteraction000299816
WBInteraction000304651
WBInteraction000304881
WBInteraction000307586
WBInteraction000308385
WBInteraction000309958
WBInteraction000311234
WBInteraction000311420
WBInteraction000312333
WBInteraction000312373
WBInteraction000312851
WBInteraction000313084
WBInteraction000317590
WBInteraction000318701
WBInteraction000320501
WBInteraction000320938
WBInteraction000321168
WBInteraction000321930
WBInteraction000325080
WBInteraction000327957
WBInteraction000329287
WBInteraction000329382
WBInteraction000330179
WBInteraction000330431
WBInteraction000333732
WBInteraction000335317
WBInteraction000338943
WBInteraction000342225
WBInteraction000343354
WBInteraction000352300
WBInteraction000357308
WBInteraction000362738
WBInteraction000363015
WBInteraction000368738
WBInteraction000370828
WBInteraction000372561
WBInteraction000375086
WBInteraction000376231
WBInteraction000378291
WBInteraction000379142
WBInteraction000379376
WBInteraction000380722
WBInteraction000383251
WBInteraction000383538
WBInteraction000385035
WBInteraction000389634
WBInteraction000394703
WBInteraction000394871
WBInteraction000397865
WBInteraction000399019
WBInteraction000399121
WBInteraction000403706
WBInteraction000405096
WBInteraction000406034
WBInteraction000406786
WBInteraction000407059
WBInteraction000407191
WBInteraction000407203
WBInteraction000407539
WBInteraction000411843
WBInteraction000415095
WBInteraction000415564
WBInteraction000415767
WBInteraction000418485
WBInteraction000425469
WBInteraction000426962
WBInteraction000428022
WBInteraction000428951
WBInteraction000429328
WBInteraction000429636
WBInteraction000429927
WBInteraction000433235
WBInteraction000434608
WBInteraction000435890
WBInteraction000436868
WBInteraction000437885
WBInteraction000439030
WBInteraction000439177
WBInteraction000440427
WBInteraction000443976
WBInteraction000447606
WBInteraction000449607
WBInteraction000450555
WBInteraction000451540
WBInteraction000454354
WBInteraction000454652
WBInteraction000455640
WBInteraction000457962
WBInteraction000461497
WBInteraction000462574
WBInteraction000505092
Map_infoMapIVPosition5.08626Error0.003219
PositivePositive_cloneF58B3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005382
WBPaper00006437
WBPaper00024209
WBPaper00031802
WBPaper00065988
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene