WormBase Tree Display for Gene: WBGene00003099
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| WBGene00003099 | SMap | S_parent | Sequence | F17E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lys-10 | Person_evidence | WBPerson168 | |||||
| Sequence_name | F17E9.11 | ||||||||
| Molecular_name | F17E9.11 | ||||||||
| F17E9.11.1 | |||||||||
| CE07076 | |||||||||
| Other_name | CELE_F17E9.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | lys-10 | ||||||||
| DB_info | Database | AceView | gene | 4J95 | |||||
| WormQTL | gene | WBGene00003099 | |||||||
| WormFlux | gene | WBGene00003099 | |||||||
| NDB | locus_tag | CELE_F17E9.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003099|UniProtKB=O61518 | |||||||
| family | PTHR23208 | ||||||||
| NCBI | gene | 184622 | |||||||
| RefSeq | protein | NM_069004.3 | |||||||
| TREEFAM | TREEFAM_ID | TF316378 | |||||||
| TrEMBL | UniProtAcc | O61518 | |||||||
| UniProt_GCRP | UniProtAcc | O61518 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lys | ||||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036031 | ||||||||
| 00036032 | |||||||||
| 00036033 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00003090 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003091 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003092 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003093 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003094 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003095 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003096 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003097 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003098 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in innate immune response and signal transduction. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17E9.11 | |||||||
| Corresponding_transcript | F17E9.11.1 | ||||||||
| Other_sequence | CB036679.1 | ||||||||
| FE916548.1 | |||||||||
| ASC02477_1 | |||||||||
| JI172822.1 | |||||||||
| PSC01951_1 | |||||||||
| GW408552.1 | |||||||||
| GW410064.1 | |||||||||
| PSC01195_2 | |||||||||
| AS05503 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00095222 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075926 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044892 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031077 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024255 | ||||||||
| Expr1148860 | |||||||||
| Expr2013311 | |||||||||
| Expr2031542 | |||||||||
| Drives_construct | WBCnstr00036230 | ||||||||
| Construct_product | WBCnstr00036230 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (221) | |||||||||
| Interaction | WBInteraction000121120 | ||||||||
| WBInteraction000137235 | |||||||||
| WBInteraction000306805 | |||||||||
| WBInteraction000382767 | |||||||||
| WBInteraction000426128 | |||||||||
| WBInteraction000428043 | |||||||||
| WBInteraction000505016 | |||||||||
| Map_info | Map | IV | Position | 3.70831 | Error | 0.000535 | |||
| Positive | Positive_clone | F17E9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005382 | ||||||||
| WBPaper00006437 | |||||||||
| WBPaper00024209 | |||||||||
| WBPaper00028789 | |||||||||
| WBPaper00031800 | |||||||||
| WBPaper00031802 | |||||||||
| WBPaper00039111 | |||||||||
| WBPaper00059378 | |||||||||
| WBPaper00059715 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
