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WormBase Tree Display for Gene: WBGene00006436

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Name Class

WBGene00006436EvidenceCGC_data_submission
SMapS_parentSequenceCHROMOSOME_V
IdentityVersion4
NameCGC_namettn-1Person_evidenceWBPerson56
Sequence_nameW06H8.8
Molecular_name (43)
Other_nametag-7Curator_confirmedWBPerson2970
tag-211Curator_confirmedWBPerson2970
tag-58Person_evidenceWBPerson201
Y38B5A.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
Y38B5A.bCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_W06H8.8Accession_evidenceNDBBX284605
Public_namettn-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:40WBPerson1971EventImportedInitial conversion from geneace
228 May 2004 14:21:37WBPerson1971EventAcquires_mergeWBGene00021069
307 Jul 2005 09:36:06WBPerson1983EventAcquires_mergeWBGene00006401
413 Dec 2005 14:47:30WBPerson2970Name_changeCGC_namettn-1
Other_nametag-58
Acquires_mergeWBGene00006401
WBGene00021069
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttn
AlleleWBVar01016578
WBVar01631035
WBVar01016762
WBVar01460167
WBVar01973726
WBVar01588364
WBVar00459940
WBVar01016394
WBVar01016579
WBVar00459941
WBVar01905311
WBVar01016763
WBVar01973727
WBVar01588365
WBVar01016395
WBVar00459942
WBVar01588366
WBVar01016396
WBVar01016764
WBVar01016580
WBVar01973728
WBVar01588367
WBVar00459943
WBVar02141083
WBVar00027136
WBVar01016397
WBVar01016581
WBVar01016765
WBVar01016398
WBVar00459944
WBVar01588368
WBVar01016582
WBVar01016766
WBVar01016767
WBVar01016399
WBVar01588369
WBVar00459945
WBVar01016583
WBVar01588370
WBVar01016400
WBVar00459946
WBVar01016584
WBVar01016768
WBVar01016401
WBVar01016769
WBVar01016585
WBVar00316807
WBVar00459947
WBVar01016586
WBVar01016770
WBVar01016402
WBVar00263705
WBVar00316808
WBVar00459948
WBVar01016587
WBVar01016771
WBVar00304560
WBVar00459949
WBVar01016403
WBVar00142627
WBVar00304561
WBVar01016588
WBVar01016772
WBVar00459950
WBVar01016404
WBVar00304562
WBVar01016773
WBVar01016589
WBVar00459951
WBVar01016405
WBVar00065145
WBVar00459952
WBVar01016406
WBVar01924725
WBVar01497135
WBVar01016590
WBVar01016774
WBVar01499528
WBVar01016407
WBVar00459953
WBVar01899406
WBVar01016591
WBVar01016775
WBVar01016408
WBVar01899407
WBVar01488673
WBVar01016592
WBVar00459954
WBVar01016776
WBVar01016409
WBVar01016777
WBVar01016593
WBVar00459955
WBVar01016410
WBVar01016778
WBVar01016594
WBVar00459956
WBVar01016779
WBVar01016595
WBVar01016411
WBVar00459957
WBVar00459958
WBVar01016596
WBVar01016780
WBVar01016412
WBVar01016781
WBVar01016413
WBVar00459959
WBVar01016597
WBVar01678049
WBVar01016782
WBVar01016598
WBVar01016414
WBVar00459960
WBVar01016415
WBVar01016783
WBVar01016599
WBVar00459961
WBVar01016416
WBVar01016600
WBVar00459962
WBVar01016784
WBVar01016601
WBVar00459963
WBVar01016785
WBVar01016417
WBVar00459964
WBVar01016602
WBVar01016786
WBVar01016418
WBVar01016787
WBVar00459965
WBVar01016603
WBVar01016419
WBVar01499173
WBVar00459966
WBVar01016788
WBVar01499174
WBVar01016420
WBVar01016604
WBVar01651855
WBVar01016421
WBVar01651856
WBVar00459967
WBVar01016605
WBVar01016789
WBVar01016790
WBVar01016606
WBVar02104430
WBVar01651857
WBVar01016422
WBVar00459968
WBVar01016607
WBVar00459969
WBVar01016423
WBVar01651858
WBVar01016791
WBVar01016608
WBVar01651859
WBVar01016424
WBVar00459970
WBVar01016792
WBVar01016793
WBVar01651860
WBVar01016425
WBVar01016609
WBVar00459971
WBVar01016794
WBVar01651861
WBVar00459972
WBVar01016426
WBVar01016610
WBVar01651862
WBVar01016795
WBVar01016427
WBVar00459973
WBVar00210082
WBVar01016611
WBVar01651863
WBVar01016796
WBVar00210083
WBVar01016428
WBVar01016612
WBVar01499182
WBVar00459974
WBVar01016797
WBVar00210084
WBVar01016429
WBVar01016613
WBVar00459975
WBVar01499183
WBVar02122658
WBVar01651864
WBVar01016430
WBVar00459976
WBVar01016614
WBVar00210085
WBVar01651865
WBVar01016798
WBVar01016431
WBVar00459977
WBVar01016615
WBVar00210087
WBVar01651866
WBVar01016799
WBVar00586503
WBVar00459978
WBVar01016800
WBVar01016432
WBVar01651867
WBVar00210088
WBVar01016616
WBVar01016433
WBVar01016801
WBVar01016617
WBVar00586506
WBVar00210089
WBVar00459979
WBVar01016618
WBVar01016434
WBVar00459980
WBVar01499740
WBVar01016802
WBVar00586514
WBVar00210090
WBVar00459981
WBVar00210091
WBVar01016435
WBVar00586516
WBVar01016803
WBVar01016619
WBVar00459982
WBVar00586519
WBVar01016620
WBVar00320768
WBVar00210092
WBVar01016804
WBVar01016436
WBVar01016437
WBVar00210093
WBVar01016621
WBVar01016805
WBVar00320769
WBVar00459983
WBVar00586521
WBVar00257485
WBVar01016438
WBVar01016806
WBVar00210094
WBVar00586522
WBVar01016622
WBVar00459984
WBVar01016807
WBVar00586527
WBVar01016439
WBVar01016623
WBVar00459985
WBVar00210095
WBVar01016440
WBVar00586528
WBVar01016808
WBVar00210096
WBVar00459986
WBVar01016624
WBVar01016441
WBVar00586529
WBVar00459987
WBVar00210097
WBVar01862508
WBVar01016809
WBVar01016625
WBVar01016810
WBVar00459988
WBVar00210098
WBVar00586531
WBVar01016626
WBVar01016442
WBVar00459989
WBVar01016627
WBVar01016811
WBVar00210099
WBVar01016443
WBVar01490548
WBVar00459990
WBVar01016812
WBVar00210100
WBVar01016628
WBVar01016444
WBVar01016629
WBVar00210101
WBVar01016445
WBVar01016813
WBVar01016630
WBVar01016814
WBVar02079605
WBVar00210102
WBVar01016446
WBVar00303569
WBVar01016447
WBVar01016631
WBVar00210103
WBVar01016815
WBVar01016448
WBVar01016816
WBVar01016632
WBVar00210104
WBVar01016817
WBVar01016633
WBVar00210105
WBVar01016449
WBVar00210106
WBVar01016634
WBVar01016818
WBVar00277666
WBVar01016450
WBVar00277667
WBVar01016635
WBVar01016451
WBVar01016819
WBVar00210107
WBVar01016820
WBVar01016636
WBVar00210108
WBVar00277668
WBVar01016452
WBVar00210109
WBVar01016637
WBVar01016821
WBVar01016453
WBVar00210110
WBVar01016822
WBVar01016638
WBVar01016454
WBVar01500129
WBVar01016639
WBVar01016455
WBVar01016823
WBVar00210111
WBVar00210112
WBVar01016456
WBVar01016640
WBVar01016824
WBVar01016825
WBVar01016457
WBVar01016641
WBVar00210113
WBVar01016826
WBVar01016642
WBVar01016458
WBVar01016643
WBVar01819396
WBVar01016827
WBVar01016459
WBVar00459822
WBVar01016460
WBVar02125146
WBVar02072522
WBVar01016828
WBVar01819397
WBVar01016644
WBVar00459823
WBVar01016461
WBVar01016829
WBVar01016645
WBVar01016462
WBVar00459824
WBVar01016646
WBVar01016830
WBVar01016463
WBVar00459825
WBVar01016647
WBVar01016831
WBVar01016648
WBVar00459826
WBVar01016464
WBVar01016832
WBVar01016465
WBVar00459827
WBVar01016649
WBVar01016833
WBVar01944981
WBVar01016650
WBVar01016834
WBVar00459828
WBVar01016466
WBVar01016467
WBVar00459829
WBVar01016651
WBVar01016835
WBVar01998035
WBVar00459830
WBVar01016652
WBVar01016836
WBVar01998036
WBVar01016468
WBVar00459831
WBVar01998037
WBVar01016653
WBVar01016837
WBVar01016469
WBVar01016838
WBVar01016470
WBVar00459832
WBVar01016654
WBVar01016655
WBVar01016839
WBVar00459833
WBVar01016471
WBVar01016840
WBVar01016656
WBVar00459834
WBVar01016472
WBVar01016841
WBVar01016473
WBVar01016657
WBVar00459835
WBVar01016658
WBVar01016842
WBVar01016474
WBVar00459836
WBVar01016843
WBVar00264514
WBVar01016475
WBVar01016659
WBVar00459837
WBVar01016476
WBVar01016660
WBVar01016844
WBVar00459838
WBVar01016477
WBVar01016661
WBVar00459839
WBVar01016845
WBVar01016478
WBVar00459840
WBVar01016846
WBVar01016662
WBVar01016847
WBVar00459841
WBVar01016663
WBVar01016479
WBVar01016664
WBVar01016480
WBVar00459842
WBVar01016848
WBVar00067869
WBVar01016849
WBVar01016665
WBVar01016481
WBVar00459843
WBVar01016482
WBVar00310176
WBVar01016666
WBVar01016850
WBVar00459844
WBVar01016667
WBVar01016851
WBVar01016483
WBVar01484148
WBVar00459845
WBVar01016852
WBVar01016484
WBVar00459846
WBVar01484149
WBVar01016668
WBVar01016485
WBVar00459847
WBVar01016853
WBVar01484150
WBVar01016669
WBVar00459848
WBVar01016854
WBVar01016670
WBVar01484151
WBVar01016486
WBVar01016671
WBVar01016487
WBVar01016855
WBVar00459849
WBVar01016488
WBVar01016672
WBVar01016856
WBVar00459850
WBVar01016857
WBVar01016489
WBVar01016673
WBVar00459851
WBVar00459852
WBVar01016858
WBVar01016490
WBVar01016674
WBVar00145542
WBVar00459853
WBVar01016675
WBVar01016859
WBVar01016491
WBVar00459854
WBVar01016860
WBVar01016492
WBVar01016676
WBVar02010829
WBVar01016861
WBVar01016493
WBVar01016677
WBVar00459855
WBVar01016678
WBVar01016862
WBVar01016494
WBVar00459856
WBVar00142533
WBVar01016679
WBVar01016495
WBVar00459857
WBVar01016863
WBVar02043433
WBVar01016680
WBVar01016496
WBVar01016864
WBVar01495569
WBVar00459858
WBVar02070147
WBVar00459859
WBVar01489130
WBVar01016681
WBVar01016497
WBVar01016865
WBVar01016682
WBVar01016498
WBVar00092288
WBVar01016866
WBVar00459860
WBVar01016499
WBVar01016867
WBVar01016683
WBVar00459861
WBVar00459862
WBVar01016684
WBVar01016500
WBVar01016868
WBVar01016501
WBVar01016685
WBVar00459863
WBVar01016869
WBVar00272076
WBVar00459864
WBVar01016686
WBVar02152268
WBVar01016502
WBVar00272077
WBVar01016503
WBVar00459865
WBVar01016687
WBVar00272078
WBVar01016688
WBVar00459866
WBVar01016504
WBVar00272079
WBVar00459867
WBVar01016689
WBVar01016505
WBVar00272080
WBVar01016690
WBVar01016506
WBVar00272081
WBVar00459868
WBVar01016691
WBVar00272082
WBVar02121264
WBVar00459869
WBVar01016507
WBVar00302186
WBVar01016508
WBVar01016692
WBVar00459870
WBVar00272083
WBVar01016509
WBVar00272084
WBVar00459871
WBVar01016693
WBVar01016510
WBVar00459872
WBVar00272085
WBVar01016694
WBVar00272086
WBVar00459873
WBVar01016695
WBVar00318920
WBVar01016511
WBVar01661191
WBVar01016512
WBVar01016696
WBVar00318921
WBVar00459874
WBVar00459875
WBVar01016513
WBVar01016697
WBVar00318922
WBVar00302795
WBVar01016698
WBVar01016514
WBVar00459876
WBVar01016515
WBVar00459877
WBVar01016699
WBVar00459878
WBVar01016700
WBVar01016516
WBVar00459879
WBVar01016701
WBVar01016517
WBVar01016518
WBVar00459880
WBVar01016702
WBVar00459881
WBVar01016703
WBVar01016519
WBVar01016704
WBVar01016520
WBVar00459882
WBVar00459883
WBVar01493018
WBVar01016521
WBVar01016705
WBVar00459884
WBVar01016522
WBVar01016706
WBVar00459885
WBVar01016523
WBVar01016707
WBVar00459886
WBVar01016708
WBVar01016524
WBVar00459887
WBVar01016525
WBVar01016709
WBVar01016710
WBVar00145578
WBVar00459888
WBVar01016526
WBVar00459889
WBVar01016711
WBVar01016527
WBVar00459890
WBVar01016712
WBVar01016528
WBVar01016529
WBVar00459891
WBVar01016713
WBVar01016530
WBVar00459892
WBVar01016714
WBVar01016715
WBVar01016531
WBVar00459893
WBVar02145351
WBVar00253527
WBVar01016716
WBVar00459894
WBVar01016532
WBVar01016717
WBVar00459895
WBVar01016533
WBVar00459896
WBVar01016718
WBVar01016534
WBVar01016719
WBVar00459897
WBVar01016535
WBVar01016720
WBVar01016536
WBVar01016352
WBVar00459898
WBVar01016353
WBVar01016537
WBVar00459899
WBVar01016721
WBVar00598902
WBVar01016354
WBVar00459900
WBVar01016722
WBVar01016538
WBVar01808239
WBVar00459901
WBVar01016539
WBVar01016355
WBVar01016723
WBVar01016540
WBVar01808240
WBVar00459902
WBVar01016724
WBVar01016356
WBVar01016541
WBVar00459903
WBVar01016725
WBVar01808241
WBVar01016357
WBVar00459904
WBVar01016726
WBVar01808242
WBVar01016542
WBVar01016358
WBVar01808243
WBVar01016359
WBVar01016543
WBVar00459905
WBVar01016727
WBVar01016360
WBVar00459906
WBVar01808244
WBVar01016544
WBVar01016728
WBVar01808245
WBVar01016729
WBVar00459907
WBVar01016545
WBVar01016361
WBVar01016362
WBVar01808246
WBVar01016546
WBVar00459908
WBVar01016730
WBVar01016731
WBVar01016547
WBVar00459909
WBVar01016363
WBVar01808247
WBVar01016732
WBVar01016548
WBVar00459910
WBVar01808248
WBVar01016364
WBVar01740429
WBVar00459911
WBVar01016549
WBVar01740430
WBVar00322626
WBVar01808249
WBVar01016365
WBVar02078592
WBVar01016733
WBVar01016550
WBVar01740431
WBVar00459912
WBVar01016366
WBVar00322627
WBVar01016734
WBVar00322628
WBVar01016367
WBVar00459913
WBVar01016735
WBVar01740432
WBVar01016551
WBVar01016552
WBVar01016368
WBVar01016736
WBVar01740433
WBVar00459914
WBVar01016369
WBVar01016737
WBVar01016553
WBVar00459915
WBVar01740434
WBVar01016370
WBVar01016554
WBVar01016738
WBVar01740435
WBVar00459916
WBVar01740436
WBVar02034580
WBVar01016371
WBVar01016739
WBVar01016555
WBVar00459917
WBVar01016740
WBVar00262019
WBVar01740437
WBVar01016556
WBVar01016372
WBVar00459918
WBVar00459919
WBVar01016373
WBVar01016557
WBVar01740438
WBVar01016741
WBVar01016742
WBVar01740439
WBVar01016374
WBVar00459920
WBVar01499496
WBVar01016558
WBVar01740440
WBVar01016375
WBVar00459921
WBVar01016743
WBVar01016559
WBVar01842342
WBVar00262022
WBVar01016376
WBVar01016560
WBVar01740441
WBVar00459922
WBVar01842343
WBVar01016744
WBVar01775222
WBVar00459923
WBVar01740442
WBVar02074321
WBVar01016745
WBVar01016377
WBVar01016561
WBVar01499316
WBVar02136448
WBVar02015367
WBVar01016746
WBVar01016562
WBVar00459924
WBVar01740443
WBVar01016378
WBVar02136449
WBVar01016747
WBVar01016563
WBVar01740444
WBVar00459925
WBVar01498949
WBVar01016379
WBVar02136450
WBVar00459926
WBVar01740445
WBVar01016564
WBVar01016748
WBVar00297617
WBVar01460147
WBVar01016380
WBVar01822080
WBVar01016565
WBVar00459927
WBVar01740446
WBVar02136451
WBVar01460148
WBVar00297618
WBVar01016381
WBVar01016749
WBVar01016382
WBVar01016566
WBVar02136452
WBVar00459928
WBVar01740447
WBVar01016750
WBVar01460150
WBVar01016383
WBVar00459929
WBVar01016751
WBVar01490856
WBVar01740448
WBVar02136453
WBVar01460153
WBVar01016567
WBVar00459930
WBVar00069794
WBVar01460154
WBVar02136454
WBVar01016384
WBVar01016568
WBVar00249871
WBVar01016752
WBVar01016385
WBVar00459931
WBVar01460155
WBVar01016753
WBVar01016569
WBVar02136455
WBVar01823745
WBVar00459932
WBVar01016754
WBVar01016570
WBVar01016386
WBVar02136456
WBVar01460156
WBVar01460157
WBVar02136457
WBVar01016387
WBVar01016571
WBVar00459933
WBVar01016755
WBVar01016388
WBVar01973720
WBVar01016756
WBVar01016572
WBVar01460158
WBVar00459934
WBVar02136458
WBVar01016757
WBVar02136459
WBVar01973721
WBVar01016389
WBVar01460159
WBVar00459935
WBVar01016573
WBVar01016574
WBVar01460160
WBVar01016758
WBVar01016390
WBVar02136460
WBVar00459936
WBVar01973722
WBVar02151788
WBVar01016575
WBVar00459937
WBVar01016759
WBVar01460163
WBVar01016391
WBVar01973723
WBVar01973724
WBVar00459938
WBVar01500066
WBVar01460164
WBVar01016392
WBVar02023741
WBVar01016760
WBVar01016576
WBVar01016761
WBVar01973725
WBVar00459939
WBVar02023742
WBVar01460165
WBVar01016393
WBVar01016577
StrainWBStrain00035550
WBStrain00035671
WBStrain00035980
RNASeq_FPKM (74)
GO_annotation (25)
Ortholog (28)
Paralog (17)
Structured_descriptionConcise_descriptionttn-1, through multiple splicing, encodes at least six protein isoformsthat are orthologs of titin (OMIM:188840, mutated in cardiomyopathy ortibial muscular dystrophy), with the three largest isoforms being 2.2MDa, 1.2 MDa and 301 kDa; TTN-1 isoforms are expressed in body wall andvulval muscle, localized to the centers of I-bands, with the two largestisoforms expressed in all muscles except pharyngeal; the largest TTN-1isoform contains 56 Ig domains, 11 FnIII domains, a twitchin-likeprotein kinase domain, a domain similar to the elastic PEVK domain ofvertebrate titin, 96 tandem copies of a 16-residue motif predicted tocomprise a coiled-coil domain, and two other short multiply repeatedmotifs; the TTN-1 kinase domain is catalytically active, and itsactivity is quantitatively regulated by alternative splicing of anadjacent autoinhibitory domain; TTN-1 is mislocalized in analpha-actinin mutant (atn-1[ok84]); ttn-1 is transcribed from at leasttwo promoters, and its transcription is stimulated by NFI-1.Paper_evidenceWBPaper00005546
WBPaper00006525
WBPaper00026912
WBPaper00027070
Curator_confirmedWBPerson567
Date_last_updated18 Jan 2007 00:00:00
Automated_descriptionEnables actin filament binding activity and myosin binding activity. Predicted to be involved in phosphorylation. Located in A band and I band. Expressed in muscle cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS (14)
Corresponding_CDS_historyW06H8.8a:wp262
W06H8.8b:wp262
W06H8.8d:wp262
W06H8.8e:wp262
W06H8.8f:wp262
W06H8.8g:wp262
Corresponding_transcript (15)
Other_sequence (76)
Associated_feature (48)
Experimental_infoRNAi_result (15)
Expr_patternChronogram625
Expr2286
Expr6846
Expr9017
Expr1032615
Expr1158464
Expr2017574
Expr2035713
Drives_constructWBCnstr00002629
AntibodyWBAntibody00000570
WBAntibody00000571
WBAntibody00002134
WBAntibody00002135
WBAntibody00002136
Microarray_results (80)
Expression_cluster (261)
Interaction (19)
Map_infoMapVPosition-0.235725Error0.011128
PositivePositive_cloneW06H8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkGene name created from parsing 'genotype' field from CGC strain informationCGC_data_submission
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene