WormBase Tree Display for Variation: WBVar01460156

WBVar01460156 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01460156
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.6164708G>A
  Sequence_details: SMap: S_parent: Sequence: Y38B5A
    Flanking_sequences: CAGAGTTACGGTTTCTCTTTCTGTGCTTGT ACTTGAAGTGAAGTTGGCTTGCTTGTGACT
    Mapping_target: Y38B5A
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027661 From_analysis: WGS_Andersen
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00027669 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193345813
        dbSNP_ss ss 295521732
    Status: Live
  Affects: Gene: WBGene00006436
    Transcript: W06H8.8f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8f.1:c.27177C>T
        HGVSp: CE52428:p.Val9059=
        cDNA_position: 27177
        CDS_position: 27177
        Protein_position: 9059
        Exon_number: 30/60
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8b.1:c.25899C>T
        HGVSp: CE52423:p.Val8633=
        cDNA_position: 25992
        CDS_position: 25899
        Protein_position: 8633
        Exon_number: 30/58
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.1:c.27177C>T
        HGVSp: CE52437:p.Val9059=
        cDNA_position: 27270
        CDS_position: 27177
        Protein_position: 9059
        Exon_number: 31/61
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8i.1:c.25899C>T
        HGVSp: CE52442:p.Val8633=
        cDNA_position: 25899
        CDS_position: 25899
        Protein_position: 8633
        Exon_number: 29/57
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.2:c.27177C>T
        HGVSp: CE52437:p.Val9059=
        cDNA_position: 27270
        CDS_position: 27177
        Protein_position: 9059
        Exon_number: 31/60
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8h.1:c.27177C>T
        HGVSp: CE52451:p.Val9059=
        cDNA_position: 27177
        CDS_position: 27177
        Protein_position: 9059
        Exon_number: 30/58
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8d.1:c.27177C>T
        HGVSp: CE52449:p.Val9059=
        cDNA_position: 27177
        CDS_position: 27177
        Protein_position: 9059
        Exon_number: 30/58
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8e.1:c.25899C>T
        HGVSp: CE52441:p.Val8633=
        cDNA_position: 25899
        CDS_position: 25899
        Protein_position: 8633
        Exon_number: 29/56
        Codon_change: gtC/gtT
        Amino_acid_change: V
      W06H8.8g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8g.1:c.25899C>T
        HGVSp: CE52417:p.Val8633=
        cDNA_position: 25899
        CDS_position: 25899
        Protein_position: 8633
        Exon_number: 29/58
        Codon_change: gtC/gtT
        Amino_acid_change: V
  Reference: WBPaper00040707
  Method: WGS_Andersen