WormBase Tree Display for Variation: WBVar01973725
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WBVar01973725 | Name | Public_name | WBVar01973725 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00699709 | |||||||
W06H8.8a.1:c.27446-333_27446-332insCTACAT | ||||||||
W06H8.8e.1:c.26168-333_26168-332insCTACAT | ||||||||
W06H8.8d.1:c.27446-333_27446-332insCTACAT | ||||||||
W06H8.8g.1:c.26168-333_26168-332insCTACAT | ||||||||
W06H8.8i.1:c.26168-333_26168-332insCTACAT | ||||||||
W06H8.8h.1:c.27446-333_27446-332insCTACAT | ||||||||
W06H8.8f.1:c.27446-333_27446-332insCTACAT | ||||||||
W06H8.8b.1:c.26168-333_26168-332insCTACAT | ||||||||
W06H8.8a.2:c.27446-333_27446-332insCTACAT | ||||||||
HGVSg | CHROMOSOME_V:g.6162023_6162024insATGTAG | |||||||
Sequence_details | SMap | S_parent | Sequence | H12N23 | ||||
Flanking_sequences | TTTACTAGAAGCTGAAGAATCTATTAAAAT | ACAAGAAGAGATAACTAAAGATTTCTAAAATTATATTGATATGTATATTGATGTATTTTTCGCAAATGTAAATCATTAATGACAAATTGTTGTTTGGTAGGTTATTTTTAAAAAGACTGGATCTTAATAGCAGAAACTGAAACAAAGTTATAAATATCTTTACCATGGAACATGAACTTTCTTTTTCGAAAATGCCAAAACTAATAAATAAAACAGTTTGAATATGTTTTGATAAATTTACAATTTTCTAGAGAGTAAAAAATATACTGTAAAATACAAG | ||||||
Mapping_target | H12N23 | |||||||
Source_location | 225 | CHROMOSOME_V | 6162006 | 6162007 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ATGTAG | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006436 | ||||||
Transcript | W06H8.8f.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8f.1:c.27446-333_27446-332insCTACAT | |||||||
Intron_number | 30/59 | |||||||
W06H8.8b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8b.1:c.26168-333_26168-332insCTACAT | |||||||
Intron_number | 30/57 | |||||||
W06H8.8a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8a.1:c.27446-333_27446-332insCTACAT | |||||||
Intron_number | 31/60 | |||||||
W06H8.8i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8i.1:c.26168-333_26168-332insCTACAT | |||||||
Intron_number | 29/56 | |||||||
W06H8.8a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8a.2:c.27446-333_27446-332insCTACAT | |||||||
Intron_number | 31/59 | |||||||
W06H8.8h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8h.1:c.27446-333_27446-332insCTACAT | |||||||
Intron_number | 30/57 | |||||||
W06H8.8d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8d.1:c.27446-333_27446-332insCTACAT | |||||||
Intron_number | 30/57 | |||||||
W06H8.8e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8e.1:c.26168-333_26168-332insCTACAT | |||||||
Intron_number | 29/55 | |||||||
W06H8.8g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W06H8.8g.1:c.26168-333_26168-332insCTACAT | |||||||
Intron_number | 29/57 | |||||||
Method | WGS_Flibotte |