WormBase Tree Display for Variation: WBVar00320769

WBVar00320769 Evidence: Paper_evidence: WBPaper00037659
  Name: Public_name: snx3197
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.6177096C>A
  Sequence_details: SMap: S_parent: Sequence: Y38B5A
    Flanking_sequences: GGTGCAAGTTTCTCCTTTGTTGGTTCGAAAGTAGTTGCAGTAGTCTCTGG ACTTGAACATCTTTGTGCTCGACAATTTCAGCTGGTTGTACTTCAGATGTTTCCTTTGATTCCACAGGTGCAAGTTTCTCAACTGTTGGTTCGACAGTAGGTGCACTAGTCTCTGGCACTGGCACATCCTTTTGCTCAACAATTTCAGCTGGTTCTACTTCAGATGTTTCTTTTGATTCCACAGGTGCAAGTTTC
    Mapping_target: Y38B5A
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022164
    Laboratory: IS
    Analysis: WGS_Jarriault
    Status: Live
  Affects: Gene: WBGene00006436
    Transcript: W06H8.8f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8f.1:c.15816G>T
        HGVSp: CE52428:p.Val5272=
        cDNA_position: 15816
        CDS_position: 15816
        Protein_position: 5272
        Exon_number: 25/60
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8b.1:c.14538G>T
        HGVSp: CE52423:p.Val4846=
        cDNA_position: 14631
        CDS_position: 14538
        Protein_position: 4846
        Exon_number: 25/58
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.1:c.15816G>T
        HGVSp: CE52437:p.Val5272=
        cDNA_position: 15909
        CDS_position: 15816
        Protein_position: 5272
        Exon_number: 26/61
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8i.1:c.14538G>T
        HGVSp: CE52442:p.Val4846=
        cDNA_position: 14538
        CDS_position: 14538
        Protein_position: 4846
        Exon_number: 24/57
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.2:c.15816G>T
        HGVSp: CE52437:p.Val5272=
        cDNA_position: 15909
        CDS_position: 15816
        Protein_position: 5272
        Exon_number: 26/60
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8h.1:c.15816G>T
        HGVSp: CE52451:p.Val5272=
        cDNA_position: 15816
        CDS_position: 15816
        Protein_position: 5272
        Exon_number: 25/58
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8d.1:c.15816G>T
        HGVSp: CE52449:p.Val5272=
        cDNA_position: 15816
        CDS_position: 15816
        Protein_position: 5272
        Exon_number: 25/58
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8e.1:c.14538G>T
        HGVSp: CE52441:p.Val4846=
        cDNA_position: 14538
        CDS_position: 14538
        Protein_position: 4846
        Exon_number: 24/56
        Codon_change: gtG/gtT
        Amino_acid_change: V
      W06H8.8g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8g.1:c.14538G>T
        HGVSp: CE52417:p.Val4846=
        cDNA_position: 14538
        CDS_position: 14538
        Protein_position: 4846
        Exon_number: 24/58
        Codon_change: gtG/gtT
        Amino_acid_change: V
  Genetics: Map: V
  Reference: WBPaper00037659
  Method: WGS_Jarriault