WormBase Tree Display for Variation: WBVar00272082

WBVar00272082 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00272082
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.6180795G>T
  Sequence_details: SMap: S_parent: Sequence: Y38B5A
    Flanking_sequences: GTTTCTCAACTGTTGGTTCGACTGTAGGTGCACTAGTCTCTGGCACTGGAACATCCTTTTGCTCAACAATTTCAGCTGGTTCTACTTCAGATGTTTCCTT GATTCCACAGGAGCAAGTTTCTCAACTGTTGGTTCTTGGGCGGGTGCGGCAGTTGAACCTTTTTGGATAGAAGTTGTTACGTATTCAGAACATTCCATCA
    Mapping_target: Y38B5A
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00006436
    Transcript: W06H8.8f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8f.1:c.12117C>A
        HGVSp: CE52428:p.Ser4039=
        cDNA_position: 12117
        CDS_position: 12117
        Protein_position: 4039
        Exon_number: 25/60
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8b.1:c.10839C>A
        HGVSp: CE52423:p.Ser3613=
        cDNA_position: 10932
        CDS_position: 10839
        Protein_position: 3613
        Exon_number: 25/58
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.1:c.12117C>A
        HGVSp: CE52437:p.Ser4039=
        cDNA_position: 12210
        CDS_position: 12117
        Protein_position: 4039
        Exon_number: 26/61
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8i.1:c.10839C>A
        HGVSp: CE52442:p.Ser3613=
        cDNA_position: 10839
        CDS_position: 10839
        Protein_position: 3613
        Exon_number: 24/57
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.2:c.12117C>A
        HGVSp: CE52437:p.Ser4039=
        cDNA_position: 12210
        CDS_position: 12117
        Protein_position: 4039
        Exon_number: 26/60
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8h.1:c.12117C>A
        HGVSp: CE52451:p.Ser4039=
        cDNA_position: 12117
        CDS_position: 12117
        Protein_position: 4039
        Exon_number: 25/58
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8d.1:c.12117C>A
        HGVSp: CE52449:p.Ser4039=
        cDNA_position: 12117
        CDS_position: 12117
        Protein_position: 4039
        Exon_number: 25/58
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8e.1:c.10839C>A
        HGVSp: CE52441:p.Ser3613=
        cDNA_position: 10839
        CDS_position: 10839
        Protein_position: 3613
        Exon_number: 24/56
        Codon_change: tcC/tcA
        Amino_acid_change: S
      W06H8.8g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8g.1:c.10839C>A
        HGVSp: CE52417:p.Ser3613=
        cDNA_position: 10839
        CDS_position: 10839
        Protein_position: 3613
        Exon_number: 24/58
        Codon_change: tcC/tcA
        Amino_acid_change: S
  Reference: WBPaper00005369
  Method: SNP_Swan