WormBase Tree Display for Variation: WBVar00277667

WBVar00277667 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk1532
    Other_name (17)
    HGVSg: CHROMOSOME_V:g.6172914A>G
  Sequence_details: SMap: S_parent: Sequence: Y38B5A
    Flanking_sequences: TTTATCGTCCTTCTCCTGTTTCAGTTTATC TCCTTCTCCTTTTGCAGTTTAGCATTAGCC
    Mapping_target: Y38B5A
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036969
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006436
    Transcript: W06H8.8f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8f.1:c.19998T>C
        HGVSp: CE52428:p.Asp6666=
        cDNA_position: 19998
        CDS_position: 19998
        Protein_position: 6666
        Exon_number: 25/60
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8b.1:c.18720T>C
        HGVSp: CE52423:p.Asp6240=
        cDNA_position: 18813
        CDS_position: 18720
        Protein_position: 6240
        Exon_number: 25/58
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.1:c.19998T>C
        HGVSp: CE52437:p.Asp6666=
        cDNA_position: 20091
        CDS_position: 19998
        Protein_position: 6666
        Exon_number: 26/61
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8i.1:c.18720T>C
        HGVSp: CE52442:p.Asp6240=
        cDNA_position: 18720
        CDS_position: 18720
        Protein_position: 6240
        Exon_number: 24/57
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.2:c.19998T>C
        HGVSp: CE52437:p.Asp6666=
        cDNA_position: 20091
        CDS_position: 19998
        Protein_position: 6666
        Exon_number: 26/60
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8h.1:c.19998T>C
        HGVSp: CE52451:p.Asp6666=
        cDNA_position: 19998
        CDS_position: 19998
        Protein_position: 6666
        Exon_number: 25/58
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8d.1:c.19998T>C
        HGVSp: CE52449:p.Asp6666=
        cDNA_position: 19998
        CDS_position: 19998
        Protein_position: 6666
        Exon_number: 25/58
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8e.1:c.18720T>C
        HGVSp: CE52441:p.Asp6240=
        cDNA_position: 18720
        CDS_position: 18720
        Protein_position: 6240
        Exon_number: 24/56
        Codon_change: gaT/gaC
        Amino_acid_change: D
      W06H8.8g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8g.1:c.18720T>C
        HGVSp: CE52417:p.Asp6240=
        cDNA_position: 18720
        CDS_position: 18720
        Protein_position: 6240
        Exon_number: 24/58
        Codon_change: gaT/gaC
        Amino_acid_change: D
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele