WormBase Tree Display for Variation: WBVar00318920

WBVar00318920 Evidence: Paper_evidence: WBPaper00037659
  Name: Public_name: snx1348
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.6172875T>C
  Sequence_details: SMap: S_parent: Sequence: Y38B5A
    Flanking_sequences: ATCCTTTTTCAGTTTAGCATCAGCCTCCTGTTTCAGTTTATCGTCCTTCTCCTTTTTCAGTTTAGCATCGGCCTC TGTTTGAGTTTATCGTCCTTCTCCTGTTTCAGTTTATCATCCTTCTCCTTTTGCAGTTTAGCATTAGCCTCCTGTTTGAAATTATCATCCTTCTCCTT
    Mapping_target: Y38B5A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022163
    Laboratory: IS
    Analysis: WGS_Jarriault
    Status: Live
  Affects: Gene: WBGene00006436
    Transcript: W06H8.8f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8f.1:c.20037A>G
        HGVSp: CE52428:p.Gln6679=
        cDNA_position: 20037
        CDS_position: 20037
        Protein_position: 6679
        Exon_number: 25/60
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8b.1:c.18759A>G
        HGVSp: CE52423:p.Gln6253=
        cDNA_position: 18852
        CDS_position: 18759
        Protein_position: 6253
        Exon_number: 25/58
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.1:c.20037A>G
        HGVSp: CE52437:p.Gln6679=
        cDNA_position: 20130
        CDS_position: 20037
        Protein_position: 6679
        Exon_number: 26/61
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8i.1:c.18759A>G
        HGVSp: CE52442:p.Gln6253=
        cDNA_position: 18759
        CDS_position: 18759
        Protein_position: 6253
        Exon_number: 24/57
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8a.2:c.20037A>G
        HGVSp: CE52437:p.Gln6679=
        cDNA_position: 20130
        CDS_position: 20037
        Protein_position: 6679
        Exon_number: 26/60
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8h.1:c.20037A>G
        HGVSp: CE52451:p.Gln6679=
        cDNA_position: 20037
        CDS_position: 20037
        Protein_position: 6679
        Exon_number: 25/58
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8d.1:c.20037A>G
        HGVSp: CE52449:p.Gln6679=
        cDNA_position: 20037
        CDS_position: 20037
        Protein_position: 6679
        Exon_number: 25/58
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8e.1:c.18759A>G
        HGVSp: CE52441:p.Gln6253=
        cDNA_position: 18759
        CDS_position: 18759
        Protein_position: 6253
        Exon_number: 24/56
        Codon_change: caA/caG
        Amino_acid_change: Q
      W06H8.8g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W06H8.8g.1:c.18759A>G
        HGVSp: CE52417:p.Gln6253=
        cDNA_position: 18759
        CDS_position: 18759
        Protein_position: 6253
        Exon_number: 24/58
        Codon_change: caA/caG
        Amino_acid_change: Q
  Genetics: Map: V
  Reference: WBPaper00037659
  Method: WGS_Jarriault