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WormBase Tree Display for Gene: WBGene00003681

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Name Class

WBGene00003681SMapS_parentSequenceY15E3A
IdentityVersion1
NameCGC_namenhr-91Person_evidenceWBPerson600
Sequence_nameY15E3A.1
Molecular_nameY15E3A.1a
Y15E3A.1a.1
CE27779
Y15E3A.1b
CE38001
Y15E3A.1a.2
Y15E3A.1a.3
Y15E3A.1a.4
Y15E3A.1b.1
Y15E3A.1b.2
Other_nameCELE_Y15E3A.1Accession_evidenceNDBBX284606
Public_namenhr-91
DB_infoDatabaseAceViewgeneXP933
WormQTLgeneWBGene00003681
WormFluxgeneWBGene00003681
NDBlocus_tagCELE_Y15E3A.1
PanthergeneCAEEL|WormBase=WBGene00003681|UniProtKB=Q9U2R6
familyPTHR24083
NCBIgene181621
RefSeqproteinNM_001392897.1
NM_001029782.6
SwissProtUniProtAccQ9U2R6
TREEFAMTREEFAM_IDTF350737
UniProt_GCRPUniProtAccQ9U2R6
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (95)
RNASeq_FPKM (74)
GO_annotation (19)
Ortholog (35)
ParalogWBGene00001400Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003613Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003616Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003627Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003628Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003639Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003650Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003654Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003657Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003659Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021417Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015497Caenorhabditis elegansFrom_analysisPanther
WBGene00021848Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003701Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003710Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015705Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020748Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017198Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003726Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007546Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017787Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008221Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011099Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011098Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011097Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007547Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015396Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015395Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003706Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011100Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003727Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016975Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003708Caenorhabditis elegansFrom_analysisPanther
WBGene00003690Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003626Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003683Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015397Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019816Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022423Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044354Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionnhr-91 encodes a conserved nuclear receptor that is orthologous to members of the NR6 subfamily of nuclear receptors that includes Drosophila HR4 and human germ cell nuclear factor (GCNF, OMIM:600281, human and mouse GCNF are expressed primarily in the testis); by homology, NHR-91 is predicted to function as a transcription factor that may activate or repress transcription in response to a hormonal signal; however, as loss of nhr-91 activity via RNAi does not result in any obvious abnormalities, the precise role of NHR-91 in C. elegans development and/or behavior is not yet known; nhr-91 is expressed in anterior neurons, seam cells, excretory cells, the spermatheca, and the developing vulva.Paper_evidenceWBPaper00005573
WBPaper00006412
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in anterior ganglion; excretory cell; seam cell; spermatheca; and vulva. Is an ortholog of human NR6A1 (nuclear receptor subfamily 6 group A member 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY15E3A.1a
Y15E3A.1b
Corresponding_CDS_historyY15E3A.1:wp51
Y15E3A.1:wp138
Corresponding_transcriptY15E3A.1a.1
Y15E3A.1a.2
Y15E3A.1a.3
Y15E3A.1a.4
Y15E3A.1b.1
Y15E3A.1b.2
Other_sequenceES566927.1
EX499800.1
TSC10314_1
JI168333.1
MH04569
MHC02010_1
TSC13709_1
Associated_feature (24)
Transcription_factorWBTranscriptionFactor000197
Experimental_infoRNAi_result (11)
Expr_patternExpr2868
Expr1012698
Expr1031711
Expr1159050
Expr2014243
Expr2032484
Drives_constructWBCnstr00010998
WBCnstr00017594
WBCnstr00017984
WBCnstr00035950
Construct_productWBCnstr00035950
Microarray_results (29)
Expression_cluster (162)
Interaction (76)
Map_infoMapXPosition22.4209Error0.024648
PositivePositive_cloneY15E3AInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (11)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene