WormBase Tree Display for Gene: WBGene00017787
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| WBGene00017787 | SMap | S_parent | Sequence | F25E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-141 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F25E5.6 | ||||||||
| Molecular_name | F25E5.6 | ||||||||
| F25E5.6.1 | |||||||||
| CE50168 | |||||||||
| Other_name | CELE_F25E5.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-141 | ||||||||
| DB_info | Database | AceView | gene | 5H925 | |||||
| WormQTL | gene | WBGene00017787 | |||||||
| WormFlux | gene | WBGene00017787 | |||||||
| NDB | locus_tag | CELE_F25E5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017787|UniProtKB=H2KYV4 | |||||||
| family | PTHR24083 | ||||||||
| NCBI | gene | 184926 | |||||||
| RefSeq | protein | NM_001028674.4 | |||||||
| TrEMBL | UniProtAcc | H2KYV4 | |||||||
| UniProt_GCRP | UniProtAcc | H2KYV4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-141 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00036824 | ||||||||
| WBStrain00036831 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E5.6 | |||||||
| Corresponding_CDS_history | F25E5.6:wp90 | ||||||||
| F25E5.6:wp245 | |||||||||
| F25E5.6a:wp244 | |||||||||
| Corresponding_transcript | F25E5.6.1 | ||||||||
| Associated_feature | WBsf718337 | ||||||||
| WBsf1000462 | |||||||||
| Transcription_factor | WBTranscriptionFactor000817 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092056 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045509 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013875 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031378 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019685 | ||||||||
| Expr1149429 | |||||||||
| Expr2014042 | |||||||||
| Expr2032282 | |||||||||
| Drives_construct | WBCnstr00027016 | ||||||||
| Construct_product | WBCnstr00027016 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000238966 | ||||||||
| WBInteraction000459507 | |||||||||
| WBInteraction000519936 | |||||||||
| Map_info | Map | V | Position | 0.750743 | Error | 0.000202 | |||
| Positive | Positive_clone | F25E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033379 | ||||||||
| WBPaper00034489 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
