WormBase Tree Display for Gene: WBGene00003626
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| WBGene00003626 | SMap | S_parent | Sequence | K08H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-32 | Person_evidence | WBPerson600 | |||||
| Sequence_name | K08H2.8 | ||||||||
| Molecular_name | K08H2.8 | ||||||||
| K08H2.8.1 | |||||||||
| CE31557 | |||||||||
| Other_name | CELE_K08H2.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nhr-32 | ||||||||
| DB_info | Database | AceView | gene | XN873 | |||||
| WormQTL | gene | WBGene00003626 | |||||||
| WormFlux | gene | WBGene00003626 | |||||||
| NDB | locus_tag | CELE_K08H2.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003626|UniProtKB=Q21372 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 187178 | |||||||
| RefSeq | protein | NM_077800.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315401 | |||||||
| TrEMBL | UniProtAcc | Q21372 | |||||||
| UniProt_GCRP | UniProtAcc | Q21372 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (79) | |||||||||
| Strain | WBStrain00036795 | ||||||||
| WBStrain00036826 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00071448 | ||||||||
| 00071449 | |||||||||
| 00071450 | |||||||||
| 00071451 | |||||||||
| 00111308 | |||||||||
| 00111309 | |||||||||
| 00111310 | |||||||||
| 00111311 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (59) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08H2.8 | |||||||
| Corresponding_CDS_history | K08H2.8:wp83 | ||||||||
| Corresponding_transcript | K08H2.8.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000621 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00034172 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050358 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026951 | ||||||||
| Expr1031672 | |||||||||
| Expr1154062 | |||||||||
| Expr2014181 | |||||||||
| Expr2032422 | |||||||||
| Drives_construct | WBCnstr00035989 | ||||||||
| Construct_product | WBCnstr00035989 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | X | Position | 10.8102 | Error | 0.099372 | |||
| Positive | Positive_clone | K08H2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5082 | |||||||
| 4661 | |||||||||
| 4933 | |||||||||
| 5542 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00028802 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
