WormBase Tree Display for Gene: WBGene00003726
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WBGene00003726 | SMap | S_parent | Sequence | C13C4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-136 | Person_evidence | WBPerson600 | |||||
Sequence_name | C13C4.3 | ||||||||
Molecular_name | C13C4.3a | ||||||||
C13C4.3a.1 | |||||||||
CE39470 | |||||||||
C13C4.3b | |||||||||
CE52740 | |||||||||
C13C4.3b.1 | |||||||||
Other_name | CELE_C13C4.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-136 | ||||||||
DB_info | Database | AceView | gene | 5M591 | |||||
WormQTL | gene | WBGene00003726 | |||||||
WormFlux | gene | WBGene00003726 | |||||||
NDB | locus_tag | CELE_C13C4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003726|UniProtKB=O01930 | |||||||
family | PTHR24083 | ||||||||
NCBI | gene | 182566 | |||||||
RefSeq | protein | NM_001368468.4 | |||||||
NM_073638.5 | |||||||||
SwissProt | UniProtAcc | O01930 | |||||||
TrEMBL | UniProtAcc | A0A3B1DZZ4 | |||||||
UniProt_GCRP | UniProtAcc | O01930 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (34) | |||||||||
Paralog (42) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C13C4.3a | |||||||
C13C4.3b | |||||||||
Corresponding_CDS_history | C13C4.3:wp152 | ||||||||
Corresponding_transcript | C13C4.3a.1 | ||||||||
C13C4.3b.1 | |||||||||
Other_sequence | CR07094 | ||||||||
BMC05061_1 | |||||||||
CRC03575_1 | |||||||||
Associated_feature | WBsf647331 | ||||||||
WBsf647332 | |||||||||
WBsf647333 | |||||||||
WBsf647334 | |||||||||
WBsf661857 | |||||||||
WBsf232604 | |||||||||
Transcription_factor | WBTranscriptionFactor000743 | ||||||||
Experimental_info | RNAi_result | WBRNAi00040432 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00110169 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110165 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110171 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010682 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110158 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110174 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110173 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110170 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9035 | ||||||||
Expr1021413 | |||||||||
Expr1031738 | |||||||||
Expr1144497 | |||||||||
Expr1200352 | |||||||||
Expr2014036 | |||||||||
Expr2032276 | |||||||||
Drives_construct | WBCnstr00035915 | ||||||||
Construct_product | WBCnstr00016800 | ||||||||
WBCnstr00035915 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (115) | |||||||||
Map_info | Map | V | Position | 3.65949 | Error | 0.006096 | |||
Positive | Positive_clone | C13C4 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5065 | |||||||
5372 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
WBPaper00034540 | |||||||||
WBPaper00036257 | |||||||||
WBPaper00064415 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |