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WormBase Tree Display for Gene: WBGene00003726

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Name Class

WBGene00003726SMapS_parentSequenceC13C4
IdentityVersion1
NameCGC_namenhr-136Person_evidenceWBPerson600
Sequence_nameC13C4.3
Molecular_nameC13C4.3a
C13C4.3a.1
CE39470
C13C4.3b
CE52740
C13C4.3b.1
Other_nameCELE_C13C4.3Accession_evidenceNDBBX284605
Public_namenhr-136
DB_infoDatabaseAceViewgene5M591
WormQTLgeneWBGene00003726
WormFluxgeneWBGene00003726
NDBlocus_tagCELE_C13C4.3
PanthergeneCAEEL|WormBase=WBGene00003726|UniProtKB=O01930
familyPTHR24083
NCBIgene182566
RefSeqproteinNM_001368468.4
NM_073638.5
SwissProtUniProtAccO01930
TrEMBLUniProtAccA0A3B1DZZ4
UniProt_GCRPUniProtAccO01930
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (32)
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (34)
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC13C4.3a
C13C4.3b
Corresponding_CDS_historyC13C4.3:wp152
Corresponding_transcriptC13C4.3a.1
C13C4.3b.1
Other_sequenceCR07094
BMC05061_1
CRC03575_1
Associated_featureWBsf647331
WBsf647332
WBsf647333
WBsf647334
WBsf661857
WBsf232604
Transcription_factorWBTranscriptionFactor000743
Experimental_infoRNAi_resultWBRNAi00040432Inferred_automaticallyRNAi_primary
WBRNAi00110169Inferred_automaticallyRNAi_primary
WBRNAi00110165Inferred_automaticallyRNAi_primary
WBRNAi00110171Inferred_automaticallyRNAi_primary
WBRNAi00010682Inferred_automaticallyRNAi_primary
WBRNAi00110158Inferred_automaticallyRNAi_primary
WBRNAi00110174Inferred_automaticallyRNAi_primary
WBRNAi00110173Inferred_automaticallyRNAi_primary
WBRNAi00110170Inferred_automaticallyRNAi_primary
Expr_patternExpr9035
Expr1021413
Expr1031738
Expr1144497
Expr1200352
Expr2014036
Expr2032276
Drives_constructWBCnstr00035915
Construct_productWBCnstr00016800
WBCnstr00035915
Microarray_results (20)
Expression_cluster (115)
Map_infoMapVPosition3.65949Error0.006096
PositivePositive_cloneC13C4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5065
5372
Pseudo_map_position
ReferenceWBPaper00027309
WBPaper00034540
WBPaper00036257
WBPaper00064415
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene