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WormBase Tree Display for Gene: WBGene00021981

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Name Class

WBGene00021981SMapS_parentSequenceY58G8A
IdentityVersion2
NameCGC_namelgc-26Paper_evidenceWBPaper00029376
Person_evidenceWBPerson1430
Sequence_nameY58G8A.1
Molecular_nameY58G8A.1
Y58G8A.1.1
CE24478
Other_nameCELE_Y58G8A.1Accession_evidenceNDBBX284605
Public_namelgc-26
DB_infoDatabaseAceViewgene5A749
WormQTLgeneWBGene00021981
WormFluxgeneWBGene00021981
NDBlocus_tagCELE_Y58G8A.1
PanthergeneCAEEL|WormBase=WBGene00021981|UniProtKB=Q9N4R6
familyPTHR18945
NCBIgene178554
RefSeqproteinNM_070766.5
TrEMBLUniProtAccQ9N4R6
UniProt_GCRPUniProtAccQ9N4R6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
218 May 2007 16:58:23WBPerson2970Name_changeCGC_namelgc-26
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
Allele (59)
StrainWBStrain00032199
RNASeq_FPKM (74)
GO_annotation (17)
Ortholog (32)
ParalogWBGene00000042Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000043Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000044Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000045Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000046Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000050Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000051Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000053Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000054Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000055Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000056Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000057Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000058Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000059Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000060Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000061Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000062Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000232Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000233Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000845Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000951Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000955Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001133Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001373Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001512Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001586Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001587Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001588Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001591Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001593Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00002974Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00002975Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003386Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006765Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006774Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006784Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006797Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007191Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007903Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008022Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008076Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008223Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008280Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008551Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008997Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009790Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009799Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010275Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010741Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010994Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011354Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011355Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011356Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011358Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011359Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011360Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012099Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012857Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012915Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013300Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013338Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013517Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013534Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013655Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013746Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013914Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015412Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017314Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017375Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017389Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017543Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017544Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019069Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020236Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020528Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020569Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020605Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020657Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020767Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020836Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021146Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021437Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00043066Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022106Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022283Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045385Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044301Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017483Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044528Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionlgc-26 encodes a ligand-gated ion channel with similarity to the nicotinic acetylcholine receptors; lgc-26 activity is required for endocytosis by coelomocytes; an LGC-26::GFP fusion protein is expressed in coelomocytes and localizes to the cytoplasm.Paper_evidenceWBPaper00025238
Curator_confirmedWBPerson1843
Date_last_updated01 Sep 2010 00:00:00
Automated_descriptionPredicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Involved in determination of adult lifespan and endocytosis. Located in cytoplasm.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY58G8A.1
Corresponding_transcriptY58G8A.1.1
Associated_featureWBsf646626
WBsf231312
Experimental_infoRNAi_resultWBRNAi00082008Inferred_automaticallyRNAi_primary
WBRNAi00082010Inferred_automaticallyRNAi_primary
WBRNAi00057732Inferred_automaticallyRNAi_primary
WBRNAi00066346Inferred_automaticallyRNAi_primary
WBRNAi00082007Inferred_automaticallyRNAi_primary
WBRNAi00082009Inferred_automaticallyRNAi_primary
WBRNAi00021160Inferred_automaticallyRNAi_primary
Expr_patternExpr1016562
Expr1039666
Expr1161158
Expr2013105
Expr2031337
Microarray_results (19)
Expression_cluster (112)
InteractionWBInteraction000051703
WBInteraction000051704
Map_infoMapVPosition-20.005Error6.9e-05
PositivePositive_cloneY58G8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025238
WBPaper00035230
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene