WormBase Tree Display for Gene: WBGene00022283
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| WBGene00022283 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lgc-27 | Paper_evidence | WBPaper00029376 | |||||
| Person_evidence | WBPerson1430 | ||||||||
| Sequence_name | Y74E4A.1 | ||||||||
| Molecular_name | Y74E4A.1a | ||||||||
| Y74E4A.1a.1 | |||||||||
| CE30327 | |||||||||
| Y74E4A.1b | |||||||||
| CE30328 | |||||||||
| Y74E4A.1b.1 | |||||||||
| Other_name | CELE_Y74E4A.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | lgc-27 | ||||||||
| DB_info | Database | AceView | gene | 2E943 | |||||
| WormQTL | gene | WBGene00022283 | |||||||
| WormFlux | gene | WBGene00022283 | |||||||
| NDB | locus_tag | CELE_Y74E4A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022283|UniProtKB=H2KZY7 | |||||||
| family | PTHR18945 | ||||||||
| NCBI | gene | 173802 | |||||||
| RefSeq | protein | NM_171848.7 | |||||||
| NM_170980.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF315498 | |||||||
| TrEMBL | UniProtAcc | H2KZY7 | |||||||
| Q8TA50 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZY7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | lgc-27 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lgc | ||||||||
| Allele (60) | |||||||||
| Strain | WBStrain00050953 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (100) | |||||||||
| Structured_description | Automated_description | Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Expressed in AIYL and AIYR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y74E4A.1a | |||||||
| Y74E4A.1b | |||||||||
| Corresponding_transcript | Y74E4A.1a.1 | ||||||||
| Y74E4A.1b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf644115 | ||||||||
| WBsf657516 | |||||||||
| WBsf717655 | |||||||||
| WBsf987664 | |||||||||
| WBsf987665 | |||||||||
| WBsf221149 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058417 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103626 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021423 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10072 | ||||||||
| Expr1014305 | |||||||||
| Expr1039833 | |||||||||
| Expr1161835 | |||||||||
| Expr2013106 | |||||||||
| Expr2031338 | |||||||||
| Drives_construct | WBCnstr00015044 | ||||||||
| WBCnstr00024297 | |||||||||
| Construct_product | WBCnstr00024297 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (241) | |||||||||
| Map_info | Map | II | Position | -3.77576 | Error | 0.004761 | |||
| Positive | Positive_clone | Y74E4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033734 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
