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WormBase Tree Display for Gene: WBGene00019141

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Name Class

WBGene00019141SMapS_parentSequenceF59H6
IdentityVersion2
NameCGC_namebath-5Person_evidenceWBPerson655
Sequence_nameF59H6.11
Molecular_nameF59H6.11
F59H6.11.1
CE20917
Other_nameCELE_F59H6.11Accession_evidenceNDBBX284602
Public_namebath-5
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Aug 2005 16:08:42WBPerson2970Name_changeCGC_namebath-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbath
AlleleWBVar00597528Inferred_automaticallyFrom strain object: VC2975
WBVar01499702
WBVar02120604
WBVar02123182
WBVar01576020
WBVar01576021
WBVar02075091
WBVar02099263
WBVar02123007
WBVar02121537
WBVar00165909
WBVar00165910
WBVar00165911
WBVar00165912
WBVar00165913
WBVar02122097
WBVar01500106
WBVar01296879
WBVar01296880
WBVar01296881
WBVar02124326
WBVar01296882
WBVar01296884
WBVar01296885
WBVar01296886
WBVar01296887
WBVar01296888
WBVar01296889
WBVar02108506
WBVar01296890
WBVar01296891
WBVar01296892
WBVar02121946
WBVar02124543
WBVar02122524
WBVar02120133
WBVar00091182
WBVar00709132
WBVar00709133
WBVar00709134
WBVar00709135
WBVar01412776
WBVar00709136
WBVar00709137
WBVar00709138
WBVar00709139
WBVar02097554
WBVar01665636
WBVar01684440
WBVar01665637
WBVar01665638
WBVar01684441
WBVar01684442
WBVar01665639
WBVar01684443
WBVar02122773
WBVar01684444
WBVar01684445
WBVar01684446
WBVar01684447
WBVar01684448
WBVar00358343
WBVar01684449
WBVar00358344
WBVar01684450
WBVar02121124
WBVar01684451
WBVar00358345
WBVar02129418
WBVar00358346
WBVar00358347
WBVar00358348
WBVar00358349
WBVar01705331
WBVar00091058
WBVar02109733
WBVar02122433
WBVar02120776
WBVar00545764
StrainWBStrain00037609
RNASeq_FPKM (74)
Contained_in_operonCEOP2060
Ortholog (86)
ParalogWBGene00006464Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009135Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00009137Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00009247Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009945Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012195Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012196Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013569Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015012Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015014Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015015Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015590Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015595Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017405Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017452Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017460Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018223Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018441Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018442Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00018452Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018664Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
WBGene00018665Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018667Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018668Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019132Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019138Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019139Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019140Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020073Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020325Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020326Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00020329Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021727Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00021725Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021726Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021853Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045036Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044346Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020859Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023427Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019421Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022433Caenorhabditis elegansFrom_analysisTreeFam
WBGene00019699Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021724Caenorhabditis elegansFrom_analysisPanther
WBGene00015591Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015608Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015609Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015798Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015827Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015828Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015829Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015832Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015834Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015835Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015836Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015837Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015838Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015839Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016544Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016554Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016555Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016556Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016717Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016718Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016720Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018100Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018102Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018249Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020080Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020358Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020359Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020360Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020532Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021193Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021772Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022689Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00235354Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00305158Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF59H6.11
Corresponding_transcriptF59H6.11.1
Other_sequenceCR00540
CRC02056_1
CR09964
Associated_featureWBsf1011665
WBsf222734
Experimental_infoRNAi_resultWBRNAi00082625Inferred_automaticallyRNAi_primary
WBRNAi00061840Inferred_automaticallyRNAi_primary
WBRNAi00033232Inferred_automaticallyRNAi_primary
WBRNAi00049243Inferred_automaticallyRNAi_primary
WBRNAi00082528Inferred_automaticallyRNAi_primary
WBRNAi00016150Inferred_automaticallyRNAi_primary
Expr_patternExpr1025161
Expr1038264
Expr1152983
Expr2009566
Expr2027803
Drives_constructWBCnstr00026033
Construct_productWBCnstr00026033
Microarray_results (14)
Expression_cluster (110)
Interaction (78)
Map_infoMapIIPosition-13.9776Error0.002972
PositivePositive_cloneF59H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00041771
WBPaper00060694
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene