WormBase Tree Display for Gene: WBGene00021853
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| WBGene00021853 | SMap | S_parent | Sequence | Y54F10AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54F10AM.11 | |||||||
| Molecular_name | Y54F10AM.11 | ||||||||
| Y54F10AM.11.1 | |||||||||
| CE27286 | |||||||||
| Other_name | CELE_Y54F10AM.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y54F10AM.11 | ||||||||
| DB_info | Database | AceView | gene | 3D652 | |||||
| WormQTL | gene | WBGene00021853 | |||||||
| WormFlux | gene | WBGene00021853 | |||||||
| NDB | locus_tag | CELE_Y54F10AM.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021853|UniProtKB=Q9BKZ7 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 175374 | |||||||
| RefSeq | protein | NM_065179.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315997 | |||||||
| TrEMBL | UniProtAcc | Q9BKZ7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BKZ7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapp; AVG; RIM; command interneuron; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including hydrogen sulfide; rotenone; and iron oxide nanoparticle based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54F10AM.11 | |||||||
| Corresponding_transcript | Y54F10AM.11.1 | ||||||||
| Associated_feature | WBsf226283 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057397 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1026578 | ||||||||
| Expr1039595 | |||||||||
| Expr1160830 | |||||||||
| Expr2007908 | |||||||||
| Expr2026150 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (146) | |||||||||
| Map_info | Positive | Positive_clone | Y54F10AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -12.1784 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
