WormBase Tree Display for Variation: WBVar02097554
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WBVar02097554 | Name | Public_name | WBVar02097554 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00827663 | |||||||
CE20917:p.Thr175_Arg179delinsLysLeuPheLeuGly | ||||||||
F59H6.11.1:c.524_535delinsAACTTTTCCTGG | ||||||||
HGVSg | CHROMOSOME_II:g.2031314_2031325delinsCCAGGAAAAGTT | |||||||
Sequence_details | SMap | S_parent | Sequence | F59H6 | ||||
Flanking_sequences | CTGATTTTTCAGCTTCTTCCTCGCATTTTC | TCTTGAAGTGTGAAGAATGAGAGGCGAGGA | ||||||
Mapping_target | F59H6 | |||||||
Source_location | 225 | CHROMOSOME_II | 2031319 | 2031330 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CCAGGAAAAGTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019141 | ||||||
Transcript | F59H6.11.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F59H6.11.1:c.524_535delinsAACTTTTCCTGG | |||||||
HGVSp | CE20917:p.Thr175_Arg179delinsLysLeuPheLeuGly | |||||||
cDNA_position | 538-550 | |||||||
CDS_position | 524-536 | |||||||
Protein_position | 175-179 | |||||||
Exon_number | 4/7 | |||||||
Codon_change | aCACTCTTTTTGAGa/aAACTTTTCCTGGGa | |||||||
Amino_acid_change | TLFLR/KLFLG | |||||||
Method | WGS_Flibotte |