WormBase Tree Display for Gene: WBGene00016554

WBGene00016554 SMap: S_parent: Sequence: C40D2
  Identity: Version: 2
    Name: CGC_name: math-19 Person_evidence: WBPerson655
      Sequence_name: C40D2.1
      Molecular_name: C40D2.1
        C40D2.1.1
        CE51259
      Other_name: CELE_C40D2.1 Accession_evidence: NDB BX284602
      Public_name: math-19
    DB_info: Database: AceView gene 2C289
        WormQTL gene WBGene00016554
        SignaLink protein WBGene00016554
        WormFlux gene WBGene00016554
        NDB locus_tag CELE_C40D2.1
        NCBI gene 183362
        RefSeq protein NM_061746.4
        TREEFAM TREEFAM_ID TF322050
        TrEMBL UniProtAcc O76559
        UniProt_GCRP UniProtAcc O76559
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:54:47 WBPerson2970 Name_change: CGC_name: math-19
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: math
    Allele (39)
    RNASeq_FPKM (74)
    Ortholog: WBGene00159386 Caenorhabditis brenneri From_analysis: OMA
      WBGene00154588 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00143314 Caenorhabditis brenneri From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19300 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19304 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      chrII_pilon.g3548 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrII_pilon.g3551 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (83)
    Structured_description: Automated_description: Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by dafa#1 based on microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C40D2.1
    Corresponding_CDS_history: C40D2.1:wp252
    Corresponding_transcript: C40D2.1.1
  Experimental_info: RNAi_result: WBRNAi00021930 Inferred_automatically: RNAi_primary
      WBRNAi00042253 Inferred_automatically: RNAi_primary
      WBRNAi00011814 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1146244
    Microarray_results (13)
    Expression_cluster (24)
    SAGE_tag: SAGE:gaatgaataa Strand: Sense
        Unambiguously_mapped
  Map_info: Map: II Position: -14.0445 Error: 0.003613
    Positive: Positive_clone: C40D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene