WormBase Tree Display for Gene: WBGene00020358
expand all nodes | collapse all nodes | view schema
| WBGene00020358 | SMap | S_parent | Sequence | T08E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | math-39 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T08E11.2 | ||||||||
| Molecular_name | T08E11.2 | ||||||||
| T08E11.2.1 | |||||||||
| CE19569 | |||||||||
| Other_name | CELE_T08E11.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-39 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-39 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (85) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08E11.2 | |||||||
| Corresponding_transcript | T08E11.2.1 | ||||||||
| Associated_feature | WBsf220883 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018447 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052872 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035355 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026511 | ||||||||
| Expr1156470 | |||||||||
| Expr2013411 | |||||||||
| Expr2031645 | |||||||||
| Drives_construct | WBCnstr00025194 | ||||||||
| Construct_product | WBCnstr00025194 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction | WBInteraction000326849 | ||||||||
| WBInteraction000395388 | |||||||||
| Map_info | Map | II | Position | -14.3205 | Error | 0.003924 | |||
| Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062345 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
