WormBase Tree Display for Gene: WBGene00020329
expand all nodes | collapse all nodes | view schema
| WBGene00020329 | SMap | S_parent | Sequence | T07H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-26 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T07H3.6 | ||||||||
| Molecular_name | T07H3.6 | ||||||||
| T07H3.6.1 | |||||||||
| CE32065 | |||||||||
| Other_name | CELE_T07H3.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | bath-26 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00146242 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
| WBGene00152896 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00163987 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| CSP29.g12033 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP40.g12972 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| CSP40.g12973 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g3394 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in RIB; excretory system; head mesodermal cell; and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-two chemicals including tryptophan; methylmercury hydroxide; and bisphenol A based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; and SKP1/BTB/POZ domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07H3.6 | |||||||
| Corresponding_CDS_history | T07H3.6:wp86 | ||||||||
| Corresponding_transcript | T07H3.6.1 | ||||||||
| Other_sequence | MIC07218_1 | ||||||||
| Associated_feature | WBsf222701 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052803 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018404 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013869 | ||||||||
| Expr1156404 | |||||||||
| Expr2009542 | |||||||||
| Expr2027779 | |||||||||
| Drives_construct | WBCnstr00025215 | ||||||||
| Construct_product | WBCnstr00025215 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (198) | |||||||||
| Interaction | WBInteraction000369776 | ||||||||
| WBInteraction000387036 | |||||||||
| WBInteraction000436893 | |||||||||
| WBInteraction000439015 | |||||||||
| WBInteraction000456875 | |||||||||
| Map_info | Map | II | Position | -15.3685 | Error | 0.000745 | |||
| Positive | Positive_clone | T07H3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065331 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
