WormBase Tree Display for Variation: WBVar01296885
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WBVar01296885 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01296885 | |||||
Other_name | cewivar00354520 | ||||||
F59H6.11.1:c.801T>C | |||||||
CE20917:p.His267= | |||||||
HGVSg | CHROMOSOME_II:g.2030956A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | F59H6 | |||
Flanking_sequences | CCTGTCATTGCCGCTTTGATATGATCGACAGTTTCGATTTTTGAGAGACA | TGCATCTGAAAAATTTGATTTTTAGAGTTTACACAGACCGGGAGAGCTTT | |||||
Mapping_target | F59H6 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539155477 | |||
Status | Live | ||||||
Affects | Gene | WBGene00019141 | |||||
Transcript | F59H6.11.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F59H6.11.1:c.801T>C | ||||||
HGVSp | CE20917:p.His267= | ||||||
cDNA_position | 815 | ||||||
CDS_position | 801 | ||||||
Protein_position | 267 | ||||||
Exon_number | 6/7 | ||||||
Codon_change | caT/caC | ||||||
Amino_acid_change | H | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |