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WormBase Tree Display for Gene: WBGene00280697

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Name Class

WBGene00280697SMapS_parentSequencePPA_ChrX
IdentityVersion6
NameCGC_namePpa-acr-25From_analysisInferred_from_orthology
Sequence_namePPA42328
Molecular_namePPA42328
PPA42328.1
PP68338
Public_namePpa-acr-25
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-acr-25
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_namePpa-acr-25
528 May 2021 19:05:19WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-acr-25
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:00000324.8334From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.56255From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.85424From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00285866
00285867
00285868
00285869
00285870
00285871
OrthologWBGene00160990Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193860Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027889Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00043066Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133771Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g8853Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11093Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10390Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17963Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13966Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g13967Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21169Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3552Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g878Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6855Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4096Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00346.g9522Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-acr-25Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold354.g863Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00242.g7781Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06677Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013702Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02684Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12104Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40169700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00074726Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00268110Strongyloides rattiFrom_analysisWormBase-Compara
chrIV_pilon.g10627Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00089598Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00089887Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090048Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090088Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090600Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091469Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091715Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091902Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092293Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092487Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092568Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092927Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092981Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093398Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093507Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093530Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093792Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094886Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095232Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095523Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095561Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095792Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096180Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096314Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096447Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096737Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097397Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097528Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099077Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099079Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099222Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099957Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100028Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100131Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100149Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100788Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101220Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101436Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101775Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102150Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102369Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102482Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103120Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103670Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104997Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105130Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105387Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105475Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105945Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106281Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106447Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106840Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106841Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107167Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107421Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107500Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107864Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107918Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00107966Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108106Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108406Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109103Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109238Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109439Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109732Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110178Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110842Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111295Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111807Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112012Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113091Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113472Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113693Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114106Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114665Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114769Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115250Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115506Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115536Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116165Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116273Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116652Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116671Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116699Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118382Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118813Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119089Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119191Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00204046Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272915Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272918Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273181Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273506Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274031Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274324Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274759Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276039Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276047Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276280Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277073Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277528Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277591Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277660Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278203Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278589Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279258Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279699Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279750Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279938Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280196Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280443Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00284058Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304838Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00305088Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00305140Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00305149Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acr-25.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA42328
Corresponding_transcriptPPA42328.1
Other_sequenceAcan_isotig16139
Experimental_infoMicroarray_resultsGPL14372_Probes_74977
GPL14372_Probes_74978
GPL14372_Probes_74979
GPL14372_Probes_74980
Remark[190208 pad] The CGC name Ppa-acr-25 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-acr-25 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene