WormBase Tree Display for Gene: WBGene00107966
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| WBGene00107966 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-acr-7 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA18412 | ||||||||
| Molecular_name | PPA18412 | ||||||||
| PPA18412.1 | |||||||||
| PP51930 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075234 | ||||||||
| UMM-S245-9.35 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-acr-7 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-acr-10.2 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-acr-7 | ||||
| 5 | 04 Jun 2020 14:38:22 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-acr-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00181516 | ||||||||
| 00181517 | |||||||||
| 00181518 | |||||||||
| 00181519 | |||||||||
| 00181520 | |||||||||
| 00181521 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (120) | |||||||||
| Structured_description | Automated_description | Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acr-7. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA18412 | |||||||
| Corresponding_transcript | PPA18412.1 | ||||||||
| Other_sequence | JI178655.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_17395 | |||||||
| GPL14372_Probes_17396 | |||||||||
| GPL14372_Probes_17397 | |||||||||
| GPL14372_Probes_17398 | |||||||||
| GPL14372_Probes_17399 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-acr-10.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200603 pad] The CGC name Ppa-acr-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
