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WormBase Tree Display for Gene: WBGene00095232

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Name Class

WBGene00095232SMapS_parentSequencePPA_ChrX
IdentityVersion5
NameSequence_namePPA05678
Molecular_namePPA05678
PPA05678.1
PP73985
Other_nameGENEPREDICTION_SNAP300000062139
UMM-S328-7.50Person_evidenceWBPerson606
Public_namePPA05678
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:47WBPerson2970Name_changeCGC_namePpa-lgc-52
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_namePpa-lgc-52
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003213.2429From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
4.4143From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00175811
00175812
00175813
00175814
00175815
00175816
OrthologWBGene00074987Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00034444Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226159Brugia malayiFrom_analysisWormBase-Compara
WBGene00125316Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239264Onchocerca volvulusFrom_analysisWormBase-Compara
CSP39.g1835Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g18787Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
GCK72_012678Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_40282800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00267734Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA05678
Corresponding_transcriptPPA05678.1
Other_sequence (11)
Experimental_infoMicroarray_resultsGPL14372_Probes_65209
GPL14372_Probes_65210
Remark[190208 pad] The CGC name Ppa-lgc-52 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-lgc-52 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene