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WormBase Tree Display for Gene: WBGene00096314

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Name Class

WBGene00096314SMapS_parentSequencePPA_ChrII
IdentityVersion3
NameCGC_namePpa-deg-3From_analysisInferred_from_orthology
Sequence_namePPA06760
Molecular_namePPA06760
PPA06760.1
PP55513
Other_nameGENEPREDICTION_SNAP300000063126
GENEPREDICTION_SNAP300000063128
GENEPREDICTION_SNAP300000063129
UMM-S41-4.42Person_evidenceWBPerson606
Public_namePpa-deg-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00096316
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00096317
Acquires_mergeWBGene00096316
WBGene00096317
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdeg
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176390
00176391
00176392
00176393
00176394
00176395
Ortholog (36)
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans deg-3. In C. elegans, deg-3 is involved in positive regulation of locomotion involved in locomotory behavior and regulation of programmed cell death.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA06760
Corresponding_transcriptPPA06760.1
Other_sequence (93)
Experimental_infoMicroarray_resultsGPL14372_Probes_29563
GPL14372_Probes_29564
GPL14372_Probes_29565
GPL14372_Probes_29566
GPL14372_Probes_29568
GPL14372_Probes_29569
GPL14372_Probes_29570
GPL14372_Probes_29571
GPL14372_Probes_29572
GPL14372_Probes_85698
MethodGene