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WormBase Tree Display for Gene: WBGene00101775

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Name Class

WBGene00101775SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameSequence_namePPA12221
Molecular_namePPA12221
PPA12221.1
PP53598
Other_nameGENEPREDICTION_SNAP300000068673
UMM-S2838-33.15Person_evidenceWBPerson606
Public_namePPA12221
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003220.566From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.85533From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178779
00178780
00178781
00178782
00178783
00178784
OrthologOTIPU.nOt.2.0.1.g01907Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01908Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03405Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03406Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04510Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05357Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12473Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12475Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13166Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13878Panagrellus redivivusFrom_analysisWormBase-Compara
Paralog (121)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-1; lgc-18; and lgc-29.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12221
Corresponding_transcriptPPA12221.1
Experimental_infoMicroarray_resultsGPL14372_Probes_21076
GPL14372_Probes_21079
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene