WormBase Tree Display for Gene: WBGene00093398
expand all nodes | collapse all nodes | view schema
| WBGene00093398 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-acr-12 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA03844 | ||||||||
| Molecular_name | PPA03844 | ||||||||
| PPA03844.1 | |||||||||
| PP65022 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000061431 | ||||||||
| UMM-S2859-13.16 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-acr-12 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 3.162 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.054 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00175027 | ||||||||
| 00175028 | |||||||||
| 00175029 | |||||||||
| 00175030 | |||||||||
| 00175031 | |||||||||
| 00175032 | |||||||||
| 00175033 | |||||||||
| 00175034 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (120) | |||||||||
| Structured_description | Automated_description | Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-12. In C. elegans, acr-12 is involved in calcium ion import across plasma membrane and regulation of muscle contraction. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA03844 | |||||||
| Corresponding_transcript | PPA03844.1 | ||||||||
| Other_sequence | JI459184.1 | ||||||||
| GRC02574_1 | |||||||||
| Dviv_isotig26406 | |||||||||
| Acan_isotig22349 | |||||||||
| JI178643.1 | |||||||||
| DVC00708_1 | |||||||||
| EV854243.1 | |||||||||
| GR13389 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_39083 | |||||||
| GPL14372_Probes_39084 | |||||||||
| Method | Gene |
