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WormBase Tree Display for Gene: WBGene00109732

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Name Class

WBGene00109732SMapS_parentSequencePPA_ChrI
IdentityVersion4
NameCGC_namePpa-lgc-53From_analysisInferred_from_orthology
Sequence_namePPA20178
Molecular_namePPA20178
PPA20178.1
PP54988
Other_nameGENEPREDICTION_SNAP300000076997
UMM-S139-1.11Person_evidenceWBPerson606
Public_namePpa-lgc-53
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204080
324 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00204269
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00205017
Acquires_mergeWBGene00204080
WBGene00204269
WBGene00205017
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00182428
00182429
00182430
00182431
00182432
00182433
Ortholog (27)
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-53.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20178
Corresponding_transcriptPPA20178.1
Other_sequenceMI00120
EX541446.1
Acan_isotig05489
EU879912.1
Dviv_isotig20263
Acan_isotig05490
Dviv_isotig20264
JI235786.1
Dviv_isotig27206
JI226882.1
Experimental_infoMicroarray_resultsGPL14372_Probes_30663
GPL14372_Probes_87144
MethodGene