WormBase Tree Display for Gene: WBGene00090088
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| WBGene00090088 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-acr-11 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00534 | ||||||||
| Molecular_name | PPA00534 | ||||||||
| PPA00534.1 | |||||||||
| PP57308 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057664 | ||||||||
| GENEPREDICTION_SNAP300000086427 | |||||||||
| UMM-S13-38.36 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-acr-11 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00119192 | ||||
| 3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-acr-11 | ||||
| Acquires_merge | WBGene00119192 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0.967731 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.967731 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 2.7987 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 7.42838 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00173343 | ||||||||
| 00173344 | |||||||||
| 00173345 | |||||||||
| 00173346 | |||||||||
| 00173347 | |||||||||
| 00173348 | |||||||||
| 00173349 | |||||||||
| 00173350 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (120) | |||||||||
| Structured_description | Automated_description | Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-11. In C. elegans, acr-11 is involved in chemical synaptic transmission. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00534 | |||||||
| Corresponding_transcript | PPA00534.1 | ||||||||
| Other_sequence | PPC03561_1 | ||||||||
| Acan_isotig17242 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_69584 | |||||||
| GPL14372_Probes_69585 | |||||||||
| GPL14372_Probes_69586 | |||||||||
| GPL14372_Probes_69587 | |||||||||
| GPL14372_Probes_69589 | |||||||||
| GPL14372_Probes_69590 | |||||||||
| Method | Gene |
