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WormBase Tree Display for Gene: WBGene00021581

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Name Class

WBGene00021581SMapS_parentSequenceY46C8AL
IdentityVersion2
NameCGC_nameclec-70Person_evidenceWBPerson261
WBPerson655
Sequence_nameY46C8AL.3
Molecular_nameY46C8AL.3
Y46C8AL.3.1
CE40158
Other_nameY46C8AL.dCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y46C8AL.3Accession_evidenceNDBBX284604
Public_nameclec-70
DB_infoDatabaseAceViewgene4E697
WormQTLgeneWBGene00021581
WormFluxgeneWBGene00021581
NDBlocus_tagCELE_Y46C8AL.3
PanthergeneCAEEL|WormBase=WBGene00021581|UniProtKB=Q9N3X0
familyPTHR23062
NCBIgene189944
RefSeqproteinNM_068038.4
TREEFAMTREEFAM_IDTF317818
TrEMBLUniProtAccQ9N3X0
UniProt_GCRPUniProtAccQ9N3X0
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-70
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (84)
StrainWBStrain00032356
WBStrain00037631
WBStrain00004710
RNASeq_FPKM (74)
GO_annotation00094062
Ortholog (20)
ParalogWBGene00009515Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009517Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009518Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009519Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009520Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009522Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009523Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009525Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009526Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010928Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014137Caenorhabditis elegansFrom_analysisPanther
WBGene00014138Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014761Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018910Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018970Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018971Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019089Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019532Caenorhabditis elegansFrom_analysisTreeFam
WBGene00019931Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019932Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00019933Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019934Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020981Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021224Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022261Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021872Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021587Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00021582Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044642Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021583Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00021585Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021586Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00044343Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021873Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021895Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00219216Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00219399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00043702Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021879Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00023484Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00043062Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044469Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00271795Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46C8AL.3
Corresponding_CDS_historyY46C8AL.3:wp156
Corresponding_transcriptY46C8AL.3.1
Associated_featureWBsf996123
WBsf1017153
Experimental_infoRNAi_result (2)
Expr_patternExpr1020200
Expr1160118
Drives_constructWBCnstr00024496
Construct_productWBCnstr00024496
Microarray_results (14)
Expression_cluster (217)
InteractionWBInteraction000541051
WBInteraction000541054
WBInteraction000542471
WBInteraction000542587
Map_infoMapIVPosition-1.56832Error0.015894
PositivePositive_cloneY46C8ALInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031686
WBPaper00033987
WBPaper00053737
WBPaper00058665
WBPaper00059843
WBPaper00061178
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene