WormBase Tree Display for Gene: WBGene00009518
expand all nodes | collapse all nodes | view schema
| WBGene00009518 | SMap | S_parent | Sequence | F38A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-166 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F38A1.5 | ||||||||
| Molecular_name | F38A1.5 | ||||||||
| F38A1.5.1 | |||||||||
| CE48223 | |||||||||
| Other_name | CELE_F38A1.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-166 | ||||||||
| DB_info | Database | AceView | gene | 4C0 | |||||
| WormQTL | gene | WBGene00009518 | |||||||
| WormFlux | gene | WBGene00009518 | |||||||
| NDB | locus_tag | CELE_F38A1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009518|UniProtKB=A4F308 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 185435 | |||||||
| RefSeq | protein | NM_171258.6 | |||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | A4F308 | |||||||
| UniProt_GCRP | UniProtAcc | A4F308 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-166 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (156) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (56) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Expressed in rectum. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38A1.5 | |||||||
| Corresponding_CDS_history | F38A1.5:wp237 | ||||||||
| Corresponding_transcript | F38A1.5.1 | ||||||||
| Associated_feature | WBsf667739 | ||||||||
| WBsf229754 | |||||||||
| WBsf229755 | |||||||||
| WBsf229756 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046660 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075942 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014517 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014516 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046659 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2009 | ||||||||
| Expr1024875 | |||||||||
| Expr1150534 | |||||||||
| Expr2010090 | |||||||||
| Expr2028332 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (207) | |||||||||
| Interaction (52) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | IV | Position | -20.8931 | Error | 0.04623 | |||
| Positive | Positive_clone | F38A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00044217 | ||||||||
| WBPaper00064229 | |||||||||
| WBPaper00065841 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
