WormBase Tree Display for Gene: WBGene00021582
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| WBGene00021582 | SMap | S_parent | Sequence | Y46C8AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-71 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | Y46C8AL.4 | ||||||||
| Molecular_name | Y46C8AL.4 | ||||||||
| Y46C8AL.4.1 | |||||||||
| CE36741 | |||||||||
| Other_name | Y46C8AL.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y46C8AL.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | clec-71 | ||||||||
| DB_info | Database | AceView | gene | 4E699 | |||||
| WormQTL | gene | WBGene00021582 | |||||||
| WormFlux | gene | WBGene00021582 | |||||||
| NDB | locus_tag | CELE_Y46C8AL.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021582|UniProtKB=Q9N3W9 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 189945 | |||||||
| RefSeq | protein | NM_068039.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | Q9N3W9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3W9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-71 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094061 | ||||||||
| Ortholog (21) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46C8AL.4 | |||||||
| Corresponding_CDS_history | Y46C8AL.4:wp124 | ||||||||
| Corresponding_transcript | Y46C8AL.4.1 | ||||||||
| Other_sequence | CJC01578_1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020640 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056647 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017852 | ||||||||
| Expr1160119 | |||||||||
| Expr2010203 | |||||||||
| Expr2028444 | |||||||||
| Drives_construct | WBCnstr00024495 | ||||||||
| Construct_product | WBCnstr00024495 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction | WBInteraction000518667 | ||||||||
| WBInteraction000541044 | |||||||||
| WBInteraction000541052 | |||||||||
| WBInteraction000541065 | |||||||||
| WBInteraction000541066 | |||||||||
| WBInteraction000544079 | |||||||||
| Map_info | Map | IV | Position | -1.53309 | Error | 0.01456 | |||
| Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| WBPaper00032331 | |||||||||
| WBPaper00045541 | |||||||||
| WBPaper00059843 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
