WormBase Tree Display for Gene: WBGene00021582
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WBGene00021582 | SMap | S_parent | Sequence | Y46C8AL | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-71 | Person_evidence | WBPerson261 | |||
WBPerson655 | |||||||
Sequence_name | Y46C8AL.4 | ||||||
Molecular_name | Y46C8AL.4 | ||||||
Y46C8AL.4.1 | |||||||
CE36741 | |||||||
Other_name | Y46C8AL.e | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_Y46C8AL.4 | Accession_evidence | NDB | BX284604 | ||||
Public_name | clec-71 | ||||||
DB_info | Database | AceView | gene | 4E699 | |||
WormQTL | gene | WBGene00021582 | |||||
WormFlux | gene | WBGene00021582 | |||||
NDB | locus_tag | CELE_Y46C8AL.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021582|UniProtKB=Q9N3W9 | |||||
family | PTHR23062 | ||||||
NCBI | gene | 189945 | |||||
RefSeq | protein | NM_068039.4 | |||||
TREEFAM | TREEFAM_ID | TF317818 | |||||
TrEMBL | UniProtAcc | Q9N3W9 | |||||
UniProt_GCRP | UniProtAcc | Q9N3W9 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (81) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00094061 | ||||||
Ortholog (21) | |||||||
Paralog (45) | |||||||
Structured_description | Automated_description | Involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y46C8AL.4 | |||||
Corresponding_CDS_history | Y46C8AL.4:wp124 | ||||||
Corresponding_transcript | Y46C8AL.4.1 | ||||||
Other_sequence | CJC01578_1 | ||||||
Experimental_info | RNAi_result | WBRNAi00020640 | Inferred_automatically | RNAi_primary | |||
WBRNAi00056647 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017852 | ||||||
Expr1160119 | |||||||
Expr2010203 | |||||||
Expr2028444 | |||||||
Drives_construct | WBCnstr00024495 | ||||||
Construct_product | WBCnstr00024495 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (174) | |||||||
Interaction | WBInteraction000518667 | ||||||
WBInteraction000541044 | |||||||
WBInteraction000541052 | |||||||
WBInteraction000541065 | |||||||
WBInteraction000541066 | |||||||
WBInteraction000544079 | |||||||
Map_info | Map | IV | Position | -1.53309 | Error | 0.01456 | |
Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031686 | ||||||
WBPaper00032331 | |||||||
WBPaper00045541 | |||||||
WBPaper00059843 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |