WormBase Tree Display for Gene: WBGene00021587
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| WBGene00021587 | SMap | S_parent | Sequence | Y46C8AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-76 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | Y46C8AR.1 | ||||||||
| Molecular_name | Y46C8AR.1 | ||||||||
| Y46C8AR.1.1 | |||||||||
| CE31650 | |||||||||
| Other_name | Y46C8AR.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y46C8AR.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | clec-76 | ||||||||
| DB_info | Database | AceView | gene | 4E733 | |||||
| WormQTL | gene | WBGene00021587 | |||||||
| WormFlux | gene | WBGene00021587 | |||||||
| NDB | locus_tag | CELE_Y46C8AR.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021587|UniProtKB=Q9N3V9 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 189950 | |||||||
| RefSeq | protein | NM_068048.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | Q9N3V9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3V9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-76 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (43) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including Heme; tryptophan; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46C8AR.1 | |||||||
| Corresponding_CDS_history | Y46C8AR.1:wp82 | ||||||||
| Corresponding_transcript | Y46C8AR.1.1 | ||||||||
| Associated_feature | WBsf996128 | ||||||||
| WBsf228144 | |||||||||
| WBsf228145 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056654 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037121 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020644 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020914 | ||||||||
| Expr1160123 | |||||||||
| Expr2010208 | |||||||||
| Expr2028449 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (192) | |||||||||
| Map_info | Map | IV | Position | -1.25908 | Error | 0.015919 | |||
| Positive | Positive_clone | Y46C8AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031002 | ||||||||
| WBPaper00031686 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
