WormBase Tree Display for Gene: WBGene00023484
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| WBGene00023484 | SMap | S_parent | Sequence | Y54G2A | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | Y54G2A.37 | ||||||
| Molecular_name | Y54G2A.37 | |||||||
| Y54G2A.37.1 | ||||||||
| CE48881 | ||||||||
| Other_name | CELE_Y54G2A.37 | Accession_evidence | NDB | BX284604 | ||||
| Public_name | Y54G2A.37 | |||||||
| DB_info | Database | AceView | gene | 4D587 | ||||
| WormFlux | gene | WBGene00023484 | ||||||
| NDB | locus_tag | CELE_Y54G2A.37 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00023484|UniProtKB=Q688Z5 | ||||||
| family | PTHR23062 | |||||||
| NCBI | gene | 259760 | ||||||
| RefSeq | protein | NM_001028331.5 | ||||||
| TREEFAM | TREEFAM_ID | TF351352 | ||||||
| TrEMBL | UniProtAcc | Q688Z5 | ||||||
| UniProt_GCRP | UniProtAcc | Q688Z5 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 11 Aug 2004 17:19:00 | WBPerson1849 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (41) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Contained_in_operon | CEOP4650 | |||||||
| Ortholog (29) | ||||||||
| Paralog (40) | ||||||||
| Structured_description | Automated_description | Enriched in RIS; germline precursor cell; hypodermis; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and elt-2 based on tiling array; RNA-seq; and microarray studies. Is affected by ten chemicals including methylmercury hydroxide; mianserin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | Y54G2A.37 | ||||||
| Corresponding_CDS_history | Y54G2A.37:wp210 | |||||||
| Y54G2A.37:wp239 | ||||||||
| Corresponding_transcript | Y54G2A.37.1 | |||||||
| Other_sequence | CSC01224_1 | |||||||
| FD515316.1 | ||||||||
| Associated_feature | WBsf645850 | |||||||
| WBsf660006 | ||||||||
| WBsf995788 | ||||||||
| WBsf995789 | ||||||||
| WBsf995790 | ||||||||
| WBsf1016960 | ||||||||
| WBsf1016961 | ||||||||
| WBsf1016962 | ||||||||
| WBsf228057 | ||||||||
| Experimental_info | Expr_pattern | Expr1021588 | ||||||
| Expr1040136 | ||||||||
| Expr1160900 | ||||||||
| Expr2007944 | ||||||||
| Expr2026187 | ||||||||
| Microarray_results | 173015_s_at | |||||||
| GPL14144_Y54G2A.37_442-501_0.930_3_A | ||||||||
| GPL14144_Y54G2A.37_610-669_0.944_1_B | ||||||||
| GPL14144_Y54G2A.37_758-817_0.730_36_C | ||||||||
| GPL8304_CE_WBGene00023484_A | ||||||||
| GPL8304_CE_WBGene00023484_B | ||||||||
| GPL8673_Y54G2A_37P00135 | ||||||||
| GPL8673_Y54G2A_37P00143 | ||||||||
| GPL8673_Y54G2A_37P00313 | ||||||||
| Expression_cluster (116) | ||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | IV | -6.73837 | ||||||
| Reference | WBPaper00065080 | |||||||
| Method | Gene |
