WormBase Tree Display for Gene: WBGene00022261
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WBGene00022261 | SMap | S_parent | Sequence | Y73C8C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-210 | Person_evidence | WBPerson2531 | |||||
Sequence_name | Y73C8C.2 | ||||||||
Molecular_name | Y73C8C.2 | ||||||||
Y73C8C.2.1 | |||||||||
CE36051 | |||||||||
Other_name | CELE_Y73C8C.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | clec-210 | ||||||||
DB_info | Database | AceView | gene | 5D599 | |||||
WormQTL | gene | WBGene00022261 | |||||||
WormFlux | gene | WBGene00022261 | |||||||
NDB | locus_tag | CELE_Y73C8C.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022261|UniProtKB=Q9TXW7 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 190659 | |||||||
RefSeq | protein | NM_071454.6 | |||||||
TREEFAM | TREEFAM_ID | TF317818 | |||||||
TrEMBL | UniProtAcc | Q9TXW7 | |||||||
UniProt_GCRP | UniProtAcc | Q9TXW7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-210 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (38) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (15) | |||||||||
Paralog (44) | |||||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including hydrogen sulfide; tryptophan; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y73C8C.2 | |||||||
Corresponding_CDS_history | Y73C8C.2:wp112 | ||||||||
Corresponding_transcript | Y73C8C.2.1 | ||||||||
Associated_feature | WBsf231549 | ||||||||
Experimental_info | RNAi_result | WBRNAi00037805 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058355 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021396 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070123 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025739 | ||||||||
Expr1161774 | |||||||||
Expr2010120 | |||||||||
Expr2028361 | |||||||||
Drives_construct | WBCnstr00024305 | ||||||||
Construct_product | WBCnstr00024305 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (180) | |||||||||
Interaction (28) | |||||||||
Map_info | Map | V | Position | -12.7375 | Error | 0.000729 | |||
Positive | Positive_clone | Y73C8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00058665 | |||||||||
WBPaper00064375 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |