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WormBase Tree Display for Gene: WBGene00021581

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Name Class

WBGene00021581SMapS_parentSequenceY46C8AL
IdentityVersion2
NameCGC_nameclec-70Person_evidenceWBPerson261
WBPerson655
Sequence_nameY46C8AL.3
Molecular_nameY46C8AL.3
Y46C8AL.3.1
CE40158
Other_nameY46C8AL.dCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y46C8AL.3Accession_evidenceNDBBX284604
Public_nameclec-70
DB_infoDatabaseAceViewgene4E697
WormQTLgeneWBGene00021581
WormFluxgeneWBGene00021581
NDBlocus_tagCELE_Y46C8AL.3
PanthergeneCAEEL|WormBase=WBGene00021581|UniProtKB=Q9N3X0
familyPTHR23062
NCBIgene189944
RefSeqproteinNM_068038.4
TREEFAMTREEFAM_IDTF317818
TrEMBLUniProtAccQ9N3X0
UniProt_GCRPUniProtAccQ9N3X0
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-70
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (84)
StrainWBStrain00032356
WBStrain00037631
WBStrain00004710
RNASeq_FPKM (74)
GO_annotation00094062
Ortholog (20)
ParalogWBGene00009515Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009517Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009518Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009519Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009520Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00009522Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009523Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009525Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009526Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010928Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014137Caenorhabditis elegansFrom_analysisPanther
WBGene00014138Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014761Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018910Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018970Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018971Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019089Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019532Caenorhabditis elegansFrom_analysisTreeFam
WBGene00019931Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019932Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00019933Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00019934Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020981Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021224Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022261Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021872Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021587Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00021582Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044642Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021583Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00021585Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021586Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00044343Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021873Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021895Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00219216Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00219399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00043702Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021879Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00023484Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00043062Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044469Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00271795Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46C8AL.3
Corresponding_CDS_historyY46C8AL.3:wp156
Corresponding_transcriptY46C8AL.3.1
Associated_featureWBsf996123
WBsf1017153
Experimental_infoRNAi_resultWBRNAi00037120Inferred_automaticallyRNAi_primary
WBRNAi00056646Inferred_automaticallyRNAi_primary
Expr_patternExpr1020200
Expr1160118
Drives_constructWBCnstr00024496
Construct_productWBCnstr00024496
Microarray_results (14)
Expression_cluster (217)
InteractionWBInteraction000541051
WBInteraction000541054
WBInteraction000542471
WBInteraction000542587
Map_info (3)
ReferenceWBPaper00031686
WBPaper00033987
WBPaper00053737
WBPaper00058665
WBPaper00059843
WBPaper00061178
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene