Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00000061

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00000061SMapS_parentSequenceF48E3
IdentityVersion2
NameCGC_namelgc-11Paper_evidenceWBPaper00029376
Person_evidenceWBPerson1430
Sequence_nameF48E3.7
Molecular_nameF48E3.7
F48E3.7.1
CE28403
Other_nameacr-22Person_evidenceWBPerson1430
CELE_F48E3.7Accession_evidenceNDBBX284606
Public_namelgc-11
DB_infoDatabaseAceViewgeneXI124
WormQTLgeneWBGene00000061
WormFluxgeneWBGene00000061
NDBlocus_tagCELE_F48E3.7
PanthergeneCAEEL|WormBase=WBGene00000061|UniProtKB=G5EGR1
familyPTHR18945
NCBIgene181009
RefSeqproteinNM_076869.6
TrEMBLUniProtAccG5EGR1
UniProt_GCRPUniProtAccG5EGR1
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:19WBPerson1971EventImportedInitial conversion from geneace
218 May 2007 16:58:23WBPerson2970Name_changeCGC_namelgc-11
Other_nameacr-22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
Allele (43)
StrainWBStrain00007565
RNASeq_FPKM (74)
GO_annotation (17)
Ortholog (23)
ParalogWBGene00000042Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000043Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000044Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000045Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000046Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000048Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000050Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000051Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000053Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000054Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000055Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000056Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000057Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000058Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000059Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000060Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006784Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001586Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001587Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001588Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000233Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00002974Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006765Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006774Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000951Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001133Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006797Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001591Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001593Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008280Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009799Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010275Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010741Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001512Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020048Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00022247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019069Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015412Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00043066Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000062Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021981Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017375Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00002975Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012857Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017580Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010994Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013534Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008997Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000955Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020836Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017389Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008551Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000845Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007903Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007191Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022283Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011360Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011359Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011358Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013655Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011356Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011355Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020236Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011354Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045385Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044301Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017543Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017544Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013338Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013300Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020528Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013517Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000232Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020767Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021146Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022106Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008223Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020657Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013746Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008076Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008022Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017314Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021437Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009790Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003386Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020605Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020569Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012099Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013914Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001373Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012915Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017483Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044528Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionlgc-11 encodes a ligand-gated ion channel of the cys-loop superfamily with sequence similarity to nicotinic acetylcholine receptor subunits, including the vertebrate neuronal acetylcholine receptor alpha-9 subunits.Paper_evidenceWBPaper00005223
WBPaper00029376
WBPaper00031536
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated15 Sep 2010 00:00:00
Automated_descriptionPredicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF48E3.7
Corresponding_transcriptF48E3.7.1
Other_sequenceJO472935.1
Associated_featureWBsf654144
WBsf1005858
WBsf237584
Experimental_infoRNAi_resultWBRNAi00015251Inferred_automaticallyRNAi_primary
WBRNAi00076446Inferred_automaticallyRNAi_primary
WBRNAi00047745Inferred_automaticallyRNAi_primary
WBRNAi00066355Inferred_automaticallyRNAi_primary
WBRNAi00102736Inferred_automaticallyRNAi_primary
Expr_patternExpr1014041
Expr1151579
Expr2013092
Expr2031324
Drives_constructWBCnstr00037762
Construct_productWBCnstr00037762
Microarray_results (19)
Expression_cluster (102)
InteractionWBInteraction000223011
WBInteraction000248669
WBInteraction000331841
WBInteraction000444737
Map_infoMapXPosition-1.65958Error0.007174
PositivePositive_cloneF48E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4203
4360
Pseudo_map_position
ReferenceWBPaper00005223
WBPaper00025245
WBPaper00027611
WBPaper00028761
WBPaper00031384
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene