WormBase Tree Display for Gene: WBGene00021981

WBGene00021981 SMap: S_parent: Sequence: Y58G8A
  Identity: Version: 2
    Name: CGC_name: lgc-26 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: Y58G8A.1
      Molecular_name: Y58G8A.1
        Y58G8A.1.1
        CE24478
      Other_name: CELE_Y58G8A.1 Accession_evidence: NDB BX284605
      Public_name: lgc-26
    DB_info: Database: AceView gene 5A749
        WormQTL gene WBGene00021981
        WormFlux gene WBGene00021981
        NDB locus_tag CELE_Y58G8A.1
        Panther gene CAEEL|WormBase=WBGene00021981|UniProtKB=Q9N4R6
          family PTHR18945
        NCBI gene 178554
        RefSeq protein NM_070766.5
        TrEMBL UniProtAcc Q9N4R6
        UniProt_GCRP UniProtAcc Q9N4R6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-26
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (59)
    Strain: WBStrain00032199
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (32)
    Paralog (100)
    Structured_description: Concise_description: lgc-26 encodes a ligand-gated ion channel with similarity to the nicotinic acetylcholine receptors; lgc-26 activity is required for endocytosis by coelomocytes; an LGC-26::GFP fusion protein is expressed in coelomocytes and localizes to the cytoplasm. Paper_evidence: WBPaper00025238
          Curator_confirmed: WBPerson1843
          Date_last_updated: 01 Sep 2010 00:00:00
      Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Involved in determination of adult lifespan and endocytosis. Located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y58G8A.1
    Corresponding_transcript: Y58G8A.1.1
    Associated_feature: WBsf646626
      WBsf231312
  Experimental_info: RNAi_result: WBRNAi00082008 Inferred_automatically: RNAi_primary
      WBRNAi00082010 Inferred_automatically: RNAi_primary
      WBRNAi00057732 Inferred_automatically: RNAi_primary
      WBRNAi00066346 Inferred_automatically: RNAi_primary
      WBRNAi00082007 Inferred_automatically: RNAi_primary
      WBRNAi00082009 Inferred_automatically: RNAi_primary
      WBRNAi00021160 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016562
      Expr1039666
      Expr1161158
      Expr2013105
      Expr2031337
    Microarray_results (19)
    Expression_cluster (112)
    Interaction: WBInteraction000051703
      WBInteraction000051704
  Map_info: Map: V Position: -20.005 Error: 6.9e-05
    Positive: Positive_clone: Y58G8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025238
    WBPaper00035230
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene