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WormBase Tree Display for Gene: WBGene00003093

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Name Class

WBGene00003093SMapS_parentSequenceF58B3
IdentityVersion1
NameCGC_namelys-4Person_evidenceWBPerson168
Sequence_nameF58B3.1
Molecular_nameF58B3.1
F58B3.1.1
CE06003
Other_nameCELE_F58B3.1Accession_evidenceNDBBX284604
Public_namelys-4
DB_infoDatabase (10)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlys
AlleleWBVar01500079
WBVar00251744
WBVar01498996
WBVar01499925
WBVar01858270
WBVar01858271
WBVar00192105
WBVar00192106
WBVar00944093
WBVar00944094
WBVar00944095
WBVar00944096
WBVar01454280
WBVar00944097
WBVar00944098
WBVar00944099
WBVar02121776
WBVar00944100
WBVar00944101
WBVar00944102
WBVar00944103
WBVar00944104
WBVar00944105
WBVar00436298
WBVar00436299
WBVar00436300
WBVar00436301
WBVar00436302
WBVar02121622
WBVar01967030
WBVar00094184
WBVar02122611
WBVar01500245
WBVar01688184
StrainWBStrain00001930
WBStrain00032962
RNASeq_FPKM (74)
GO_annotation00069770
00069771
00069772
00069773
00110569
00110570
00110571
Ortholog (46)
ParalogWBGene00003090Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003091Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003092Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003096Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003099Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003095Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003094Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003098Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003097Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lysozyme activity. Involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF58B3.1
Corresponding_transcriptF58B3.1.1
Other_sequence (25)
Associated_featureWBsf652233
WBsf668351
WBsf718198
WBsf997893
WBsf230899
Experimental_infoRNAi_resultWBRNAi00075954Inferred_automaticallyRNAi_primary
WBRNAi00033070Inferred_automaticallyRNAi_primary
WBRNAi00048947Inferred_automaticallyRNAi_primary
WBRNAi00015941Inferred_automaticallyRNAi_primary
Expr_patternChronogram582
Expr1025658
Expr1152684
Expr2013315
Expr2031546
Drives_constructWBCnstr00002718
WBCnstr00036235
Construct_productWBCnstr00036235
Microarray_results (21)
Expression_clusterWBPaper00028802:intestine_unique
WBPaper00032425:down_in_alg-1
WBPaper00032425:down_in_zfp-1
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00033444:BacteriaDiet_regulated
WBPaper00035269:cde-1_regulated
WBPaper00037624:ets-4(ok165)_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038213:E.coli(LF82)_72h_downregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040134:nhr-49(RNAi)_regulated_protein
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00040209:B.thuringiensis_downregulated_MY18
WBPaper00040209:B.thuringiensis_downregulated_N2
WBPaper00040412:germline-regulated_daf-12_target
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00042215:wdr-23(tm1817)_downregulated
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00043945:MeHg_downregulated
WBPaper00044030:nhr-8(hd117)_downregulated
WBPaper00044246:pgrn-1_ced-3_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_downregulated_Day5
WBPaper00044760:germline_specific
WBPaper00045316:prg-1_downregulated_L2
WBPaper00045316:prg-1_downregulated_L4
WBPaper00045390:tunicamycin_downregulated
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046497:B.thuringiensis_downregulated_protein
WBPaper00046741:Garlic-Extract_upregulated_mRNA
WBPaper00046805:P-granule-RNAi_downregulated_Set1
WBPaper00048952:glucose_induced
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049018:ham-3(RNAi)_upregulated
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049217:TCER-1_downregulated
WBPaper00049290:rsks-1(sv31)_downregulated
WBPaper00049334:CE_intestine_enriched
WBPaper00049484:elt-2(RNAi)_downregulated_L1
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049736:15deg-then-25deg(12hr)_downregulated_N2
WBPaper00049905:Age_variant_expression
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049920:hyl-2(tm2031)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050332:skr-1(RNAi)-skr-2(RNAi)_downregulated
WBPaper00050412:cco-1(RNAi)_downregulated_lin-65(n3441)
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050903:mir-35-41(nDf50)_20C_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_downregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053092:procyanidins_downregulated
WBPaper00053140:IncreasingResponse_20nmAgCit
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053402:his-3(RNAi)_downregulated
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053792:Ochrobactrum_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00053814:25C_downregulated_OP50
WBPaper00054410:set-26(tm2467)_downregulated
WBPaper00054477:cisplatin_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056039:ptl-1(ok621)_downregulated
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056167:Cry5B_upregulated
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056284:ints-2(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay4
WBPaper00056586:kri-1(ok1251)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056900:PID-3_interacting
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057158:mdt-15(tm2182)_dependent_15C_upregulated
WBPaper00057265:metaformin_upregulated_OP50
WBPaper00057265:metaformin_upregulated_OP50-MR
WBPaper00057288:Cold_downregulated_protein
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058948:npr-8(ok1439)_upregulated_PA14
WBPaper00058948:PA14_upregulated
WBPaper00058958:10mGy-irradiation-72h_downregulated
WBPaper00058958:100mGy-irradiation-72h_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059253:sucrose_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059373:stt-3(RNAi)_downregulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059421:daf-1(m40)_downregulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059477:hlh-2(RNAi)_regulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059735:glucose_upregulated_N2
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059763:neuron_acr-2(n2420gf)_regulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_downregulated
WBPaper00059932:cnd-1(ju29)_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060224:atf-6(ok551)_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060445:ikb-1(nr2027)_upregulated_L1
WBPaper00060445:nfki-1(cer1)_upregulated_L1
WBPaper00060458:rnf-5(tm794)_regulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060683:hlh-11(overexpression)_upregulated
WBPaper00060703:nas-38(ok3407)_downregulated
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00060921:cat-2(e1112)_upregulated
WBPaper00060921:tph-1(mg280)_upregulated
WBPaper00061007:HB115_downregulated
WBPaper00061007:M.braciatum_downregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061340:ALN
WBPaper00061340:RID
WBPaper00061340:SMD
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061390:daf-22(ok693)_ascarosides_downregulated
WBPaper00061405:S.aureus_upregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:R10H10.3-T21H3.1
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061590:CGP37157_downregulated
WBPaper00061692:acivicin_downregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-15B(we23)_downregulated
WBPaper00062056:lin-35(n745)_downregulated
WBPaper00062056:lin-37(n758)_downregulated
WBPaper00062056:met-2(n4256)_downregulated
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062197:mec-8_upregulated_TRN
WBPaper00062293:isp-1(qm150)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062446:nhr-8(ok186)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062497:xpf-1(tm2842)_downregulated
WBPaper00062554:MAGU-2_interacting
WBPaper00062606:rotenone_downregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064005:starvation_upregulated_N2_protein
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064163:ZNFX-1_interacting_young-adult
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064473:ets-4(rrr16)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064661:lpd-3(ok2138)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064933:L1_secret_protein
WBPaper00064952:Day5_vs_Day1_upregulated_25C
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_Day5_downregulated_25C
WBPaper00064992:Eugenol_upregulated
WBPaper00065005:sams-5(RNAi)_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_downregulated_AFD
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065392:Lb.delbrueckii_upregulated
WBPaper00065392:Lb.gasseri_upregulated
WBPaper00065392:Lb.plantarum_upregulated
WBPaper00065392:Lb.reuteri_upregulated
WBPaper00065392:Lb.rhamnosus_upregulated
WBPaper00065392:P.pentosaceus_upregulated
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065623:5
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:endu-2(tm4977)_downregulated
WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065835:mtH2S-AP39-L1-treatment_downregulated_Day5
WBPaper00065841:3_0
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_4
WBPaper00065945:global-rpoa-2(-)_downregulated_transcript
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:hlh-30(RNAi)-neuron_downregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_downregulated
WBPaper00066204:CdCl2_downregulated_mRNA
WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_downregulated_WT
cgc4386_cluster_1_1
cgc4489_group_4
WBPaper00005124:progesterone_10-5M_regulated
WBPaper00005124:progesterone_10-7M_regulated
WBPaper00025099:MA_specific
WBPaper00025099:NI_specific
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00029437:rde-4_downregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031060:2-deoxy-D-glucose_downregulated
WBPaper00031184:acrylamide_upregulated
WBPaper00031850:mdt-15(RNAi)_downregulated
WBPaper00032062:age_regulated_genes
WBPaper00034661:AgNPs_downregulated
WBPaper00035424:ASER_up
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00035892:KIM5_vs_OP50_Down
WBPaper00035892:Y.pestis_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_G
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00037113:CPF_16C_down-regulated
WBPaper00037695:WC_5-day
WBPaper00038060:SUMO-1_downregulated
WBPaper00038304:octr-1_regulated
WBPaper00038427:lin-54_germline_changed
WBPaper00038462:aging_downregulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q50_up
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA100_up
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041002:HF_11d_0.2mM_Down
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041211:RPW-24_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041609:hpl-1_hpl-2_downregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00042178:hlh-29(tm284)_downregulated
WBPaper00042204:Comamonas_DA1877_downregulated
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00042258:DA1877_downregulated_YoungAdult
WBPaper00042258:HT115_downregulated_YoungAdult
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00050515:nipi-3(fr4)_upregulated
WBPaper00050650:mBmkTX_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053550:daf-19(m86)_upregulated_L1
WBPaper00055899:nitroguanidine_regulated
WBPaper00056330:mrps-5(RNAi)_downregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc6390]:Cluster_C
Interaction (108)
Map_infoMapIVPosition5.07601
PositivePositive_cloneF58B3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005382
WBPaper00006437
WBPaper00024209
WBPaper00031802
WBPaper00034591
WBPaper00039111
WBPaper00040135
WBPaper00065026
WBPaper00065988
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[140923 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods.
MethodGene