WormBase Tree Display for Expression_cluster: WBPaper00039866:SAM_daf-19_upregulated
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WBPaper00039866:SAM_daf-19_upregulated | Description | Candidate daf-19 up regulated genes with a statistically significant signal variation of 1.5-fold or greater. These were identified using a Significance Analysis of Microarrays (SAM). | |
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Species | Caenorhabditis elegans | ||
Algorithm | Lists of genes were generated using SAM (version 2.2) with a false discovery rate (FDR) of less than or equal to 5% (Q-value <= 5%). Twenty-seven repeated runs of SAM were performed using variable random seed numbers for each run. During each run of SAM, 100 permutations were performed. Genes (n =129 downregulated, n = 1 upregulated) appearing in at least 80% of all twenty-seven runs of SAM were further considered for signal variation filtering, which was used to selectively identify genes with a 1.5-fold or greater variation between the two genetic conditions used for comparison. | ||
Reference | WBPaper00039866 | ||
Microarray_results (63) | |||
Gene | WBGene00002016 | ||
WBGene00011231 | |||
WBGene00002026 | |||
WBGene00008070 | |||
WBGene00011304 | |||
WBGene00270321 | |||
WBGene00001105 | |||
WBGene00002124 | |||
WBGene00013145 | |||
WBGene00009156 | |||
WBGene00004813 | |||
WBGene00015613 | |||
WBGene00002015 | |||
WBGene00002008 | |||
WBGene00020205 | |||
WBGene00006366 | |||
WBGene00018725 | |||
WBGene00016088 | |||
WBGene00014199 | |||
WBGene00015569 | |||
WBGene00017154 | |||
WBGene00003055 | |||
WBGene00009691 | |||
WBGene00011509 | |||
WBGene00006956 | |||
WBGene00000217 | |||
WBGene00019751 | |||
WBGene00010236 | |||
WBGene00018259 | |||
WBGene00000512 | |||
WBGene00004819 | |||
WBGene00023259 | |||
WBGene00006649 | |||
WBGene00014141 | |||
WBGene00010362 | |||
WBGene00007153 | |||
WBGene00007225 | |||
WBGene00000865 | |||
WBGene00001828 | |||
WBGene00016295 | |||
WBGene00000868 | |||
WBGene00003977 | |||
WBGene00001853 | |||
WBGene00007479 | |||
WBGene00007481 | |||
WBGene00018743 | |||
WBGene00007517 | |||
WBGene00016457 | |||
WBGene00007303 | |||
WBGene00010051 | |||
WBGene00002125 | |||
WBGene00001821 | |||
WBGene00016345 | |||
WBGene00022816 | |||
WBGene00004786 | |||
WBGene00006981 | |||
WBGene00012552 | |||
WBGene00004821 | |||
WBGene00018152 | |||
WBGene00009049 | |||
Attribute_of | Microarray_experiment | WBPaper00039866:daf-19_daf-12_rep1 | |
WBPaper00039866:daf-19_daf-12_rep2 | |||
WBPaper00039866:daf-19_daf-12_rep3 | |||
WBPaper00039866:daf-19_daf-12_rep4 | |||
WBPaper00039866:daf-12_rep1 | |||
WBPaper00039866:daf-12_rep2 | |||
WBPaper00039866:daf-12_rep3 | |||
WBPaper00039866:daf-12_rep4 | |||
WBPaper00039866:WT_rep1 | |||
WBPaper00039866:WT_rep2 | |||
WBPaper00039866:WT_rep3 | |||
WBPaper00039866:WT_rep4 | |||
Regulation | Regulated_by_gene | WBGene00000914 | |
Associated_with | Life_stage | WBls:0000020 |